A5CUT4 (RL11_CLAM3) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L11

Gene names

Name:	rplK
Ordered Locus Names:	CMM_2787

Organism

Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) [Complete proteome] [HAMAP]

Taxonomic identifier

443906 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter › Clavibacter michiganensis › Clavibacter michiganensis subsp. michiganensis

Protein attributes

Sequence length	143 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein binds directly to 23S ribosomal RNA By similarity. HAMAP-Rule MF_00736
Post-translational modification	One or more lysine residues are methylated By similarity.
Sequence similarities	Belongs to the ribosomal protein L11P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
PTM	Methylation
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 143	143	50S ribosomal protein L11 HAMAP-Rule MF_00736		PRO_1000046166

Sequences

	Sequence		Length	Mass (Da)
	A5CUT4 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 355FE4F6D7F35CA1	FASTA	143	15,046
	10 20 30 40 50 60 MAPKKKVTGL IKLQIKAGAA NPAPPIGPAL GQHGVNIMEF CKAYNAQTEA QRGNVIPVEI 70 80 90 100 110 120 TVYEDRTFTF ILKTPPAAEL IKKAAGVAKG SGTPHTVKVA KLTMDQVREI AEQKQADLNA 130 140 NDIDAAAKII AGTARSMGIT VEA

References

[1]

"The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity." Gartemann K.-H., Abt B., Bekel T., Burger A., Engemann J., Fluegel M., Gaigalat L., Goesmann A., Graefen I., Kalinowski J., Kaup O., Kirchner O., Krause L., Linke B., McHardy A., Meyer F., Pohle S., Rueckert C. , Schneiker S., Zellermann E.-M., Puehler A., Eichenlaub R., Kaiser O., Bartels D. J. Bacteriol. 190:2138-2149(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NCPPB 382.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM711867 Genomic DNA. Translation: CAN02872.1.
RefSeq	YP_001223532.1. NC_009480.1.
3D structure databases
ProteinModelPortal	A5CUT4.
SMR	A5CUT4. Positions 5-143.
ModBase	Search...
Protein-protein interaction databases
STRING	443906.CMM_2787.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAN02872; CAN02872; CMM_2787.
GeneID	5175822.
KEGG	cmi:CMM_2787.
PATRIC	21456431. VBIClaMic82482_2912.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0080.
HOGENOM	HOG000082123.
KO	K02867.
OMA	KQFNAKT.
ProtClustDB	PRK00140.
Family and domain databases
Gene3D	1.10.10.250. 1 hit. 3.30.1550.10. 1 hit.
HAMAP	MF_00736_B. Ribosomal_L11_B.
InterPro	IPR000911. Ribosomal_L11. IPR006519. Ribosomal_L11_bac-typ. IPR020783. Ribosomal_L11_C. IPR020785. Ribosomal_L11_CS. IPR020784. Ribosomal_L11_N. [Graphical view]
PANTHER	PTHR11661. PTHR11661. 1 hit.
Pfam	PF00298. Ribosomal_L11. 1 hit. PF03946. Ribosomal_L11_N. 1 hit. [Graphical view]
SMART	SM00649. RL11. 1 hit. [Graphical view]
SUPFAM	SSF46906. Ribosomal_L11. 1 hit. SSF54747. Ribosomal_L11. 1 hit.
TIGRFAMs	TIGR01632. L11_bact. 1 hit.
PROSITE	PS00359. RIBOSOMAL_L11. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL11_CLAM3

Accession

Primary (citable) accession number: A5CUT4

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	June 12, 2007
Last modified:	May 1, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program