A5CU69 (A5CU69_CLAM3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative alanine racemase EMBL CAN02656.1
EC=5.1.1.1 EMBL CAN02656.1

Gene names

Name:	alrA2 EMBL CAN02656.1
Ordered Locus Names:	CMM_2573

Organism

Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) [Complete proteome] [HAMAP] EMBL CAN02656.1

Taxonomic identifier

443906 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length	566 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. SAAS SAAS009006
Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS009006
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS009006

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS009006
Molecular function	Isomerase SAAS SAAS009006 EMBL CAN02656.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5CU69 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 3C6B1A5822013958	FASTA	566	59,373
	10 20 30 40 50 60 MTEHASAPAA PVAPGRRAVV DLDAIRHNVR TLAALAAPAR TMVAVKADAY GHGALQVARA 70 80 90 100 110 120 ALEAGAESLA VLDVASAVEL RRSGITARLL AWLHGVDTDF RVAVENGIDL GVSALWELER 130 140 150 160 170 180 IAAAGRATGI RARVHLKADT GLSRNGATPE LWPDLVRAAV AADAAGELTL HALWSHLADA 190 200 210 220 230 240 SPEDDDAALA RFHEAVRVAE ELGARPVEKH LAASSAGIRL PAARFDMVRF GIAVYGISPF 250 260 270 280 290 300 DDRSGRDLGL IPAMTLEADV VSVKRVEAGH GVSYGLDHRT AGPSTLVLVP LGYADGIPRI 310 320 330 340 350 360 AAPRASVLLN GRRFPVAGRI AMDQLVLDVG DLPVEVGDTA VILGPGDRGE PTAEEWAGWA 370 380 390 400 410 420 ETIGDEIVTR VGPRVDRVHL HEHPEPEGGA ADVLSDELVP VATTDAMEEL GRAVARELGA 430 440 450 460 470 480 GDLVVLSGPL GAGKTTFTRG LGAGLGVRGP VTSPTFVLAR THPSLVDGPP LVHVDAYRLA 490 500 510 520 530 540 DARELDDLDI DFARSVVVVE WGEGKLDGVA EEWWDLRIAR PTGAGDADPD AADRADADAA 550 560 ADADPDAAPE EPRTVRIRRL RARPRA

References

[1]

"The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity." Gartemann K.-H., Abt B., Bekel T., Burger A., Engemann J., Fluegel M., Gaigalat L., Goesmann A., Graefen I., Kalinowski J., Kaup O., Kirchner O., Krause L., Linke B., McHardy A., Meyer F., Pohle S., Rueckert C. , Schneiker S., Zellermann E.-M., Puehler A., Eichenlaub R., Kaiser O., Bartels D. J. Bacteriol. 190:2138-2149(2008) [PubMed: 18192381] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM711867 Genomic DNA. Translation: CAN02656.1.
RefSeq	YP_001223318.1. NC_009480.1.
3D structure databases
ProteinModelPortal	A5CU69.
ModBase	Search...
Protein-protein interaction databases
STRING	A5CU69.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5174730.
GenomeReviews	Gene locus CMM_2573 in contig AM711867_GR.
KEGG	cmi:CMM_2573.
PATRIC	21455989. VBIClaMic82482_2692.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0787.
HOGENOM	HBG712172.
OMA	TRKEDAN.
ProtClustDB	CLSK838533.
Family and domain databases
HAMAP	MF_01201. Ala_racemase. [Tree]
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. IPR003442. UPF0079_ATPase_bac. [Graphical view]
Gene3D	G3DSA:2.40.37.10. Ala_racemase/Decarboxylase_C. 1 hit.
KO	K01775.
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. PF02367. UPF0079. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. Alr. 1 hit. TIGR00150. HI0065_YjeE. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5CU69_CLAM3

Accession

Primary (citable) accession number: A5CU69

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	January 25, 2012
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)