A5CT08 (A5CT08_CLAM3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative 4-aminobutyrate aminotransferase EMBL CAN02233.1
EC=2.6.1.19 EMBL CAN02233.1

Gene names

Name:	gabT EMBL CAN02233.1
Ordered Locus Names:	CMM_2163

Organism

Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) [Complete proteome] [HAMAP] EMBL CAN02233.1

Taxonomic identifier

443906 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length	471 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL CAN02233.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	gamma-aminobutyric acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5CT08 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 674CD30DD11F7557	FASTA	471	49,273
	10 20 30 40 50 60 MTDTLDSARV GIPAGPASDS PAASARDARP QVPQERRIVT EIPGPLSREL HERRKRVVPP 70 80 90 100 110 120 GVSSLLPVYI SRAHGAIVED VDGNRFIDLG AGIGVTTVGH TRQEVVDAAT AQLGDVIHTL 130 140 150 160 170 180 FTVTPYEEYV RVAELLAEHT PGTHEKRTVL VNSGAEAVEN GVKIARKHTG RRAVAVLDHG 190 200 210 220 230 240 YHGRTNLTMA MNYKASPYGT GFGPFAGDVY HAPSSYPYHD GLSGAEAAAR TISYLEKRIG 250 260 270 280 290 300 ATDLACVVAE PIQGEGGFMV PADGFLPALQ EWCTANGVVF IADEIQSGLA RTGRFFASEH 310 320 330 340 350 360 LGLVPDLVLT AKGIAGGLPL AGVTGRAEIM DSALPGGLGG TFGGNPVAAA AAVAVFEAIE 370 380 390 400 410 420 THGLLAEATR IGDHLHRTLT ELQREHDIIG DVRGIGAMIA IELVQPGTGS TTKEPNAEAV 430 440 450 460 470 AAIAAYCHAH GVIILTAGTY GNVLRFLPSL AISEELLDDA LGVIADAFRA L

References

[1]

"The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity." Gartemann K.-H., Abt B., Bekel T., Burger A., Engemann J., Fluegel M., Gaigalat L., Goesmann A., Graefen I., Kalinowski J., Kaup O., Kirchner O., Krause L., Linke B., McHardy A., Meyer F., Pohle S., Rueckert C. , Schneiker S., Zellermann E.-M., Puehler A., Eichenlaub R., Kaiser O., Bartels D. J. Bacteriol. 190:2138-2149(2008) [PubMed: 18192381] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM711867 Genomic DNA. Translation: CAN02233.1.
RefSeq	YP_001222908.1. NC_009480.1.
3D structure databases
ProteinModelPortal	A5CT08.
ModBase	Search...
Protein-protein interaction databases
STRING	A5CT08.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5173550.
GenomeReviews	Gene locus CMM_2163 in contig AM711867_GR.
KEGG	cmi:CMM_2163.
PATRIC	21455169. VBIClaMic82482_2291.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0160.
HOGENOM	HBG725944.
OMA	EWCTANG.
ProtClustDB	CLSK831255.
Family and domain databases
InterPro	IPR004632. 4NH2But_aminotransferase_bac. IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 2 hits.
KO	K07250.
PANTHER	PTHR11986. Aminotrans_3. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR00700. GABAtrnsam. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5CT08_CLAM3

Accession

Primary (citable) accession number: A5CT08

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)