Unreviewed,
UniProtKB/TrEMBL A5CSM7 (A5CSM7_CLAM3)
Last modified
March 2, 2010.
Version 28.
History...
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Submitted name: Putative dihydrodipicolinate synthase EMBL CAN02098.1 EC=4.2.1.52 EMBL CAN02098.1 | ||||
| Gene names |
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| Organism | Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 443906 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter |
Protein attributes
| Sequence length | 324 AA. |
| Sequence status | Complete. |
| Protein existence | Predicted. |
General annotation (Comments)
| Catalytic activity | L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H2O. Spearmint SPM005263 |
| Pathway | Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 3/4. Spearmint SPM005263 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Diaminopimelate biosynthesis Spearmint SPM005263 Lysine biosynthesis Spearmint SPM005263 |
| Cellular component | Cytoplasm Spearmint SPM005263 |
| Ligand | Schiff base Spearmint SPM005263 |
| Molecular function | Lyase Spearmint SPM005263 EMBL CAN02098.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | diaminopimelate biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | dihydrodipicolinate synthase activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequences
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References
| [1] | "The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity." Gartemann K.-H., Abt B., Bekel T., Burger A., Engemann J., Fluegel M., Gaigalat L., Goesmann A., Graefen I., Kalinowski J., Kaup O., Kirchner O., Krause L., Linke B., McHardy A., Meyer F., Pohle S., Rueckert C.  Bartels D.J. Bacteriol. 190:2138-2149(2008) [PubMed: 18192381] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AM711867 Genomic DNA. Translation: CAN02098.1. |
| RefSeq | YP_001222777.1. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | A5CSM7. |
Genome annotation databases | |
| GeneID | 5175185. |
| GenomeReviews | Gene locus CMM_2035 in contig AM711867_GR. |
| KEGG | cmi:CMM_2035. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG0329. |
| HOGENOM | HBG358848. |
| OMA | EGTDGIV. |
| ProtClustDB | CLSK2325336. |
Family and domain databases | |
| InterPro | IPR013785. Aldolase_TIM. IPR005263. DapA_synth. IPR002220. Dihydrodipicolinate_synth. IPR020625. Dihydrodipicolinate_synth_AS. [Graphical view] |
| Gene3D | G3DSA:3.20.20.70. Aldolase_TIM. 1 hit. |
| PANTHER | PTHR12128. DHDPS. 1 hit. |
| Pfam | PF00701. DHDPS. 1 hit. [Graphical view] |
| PRINTS | PR00146. DHPICSNTHASE. |
| TIGRFAMs | TIGR00674. dapA. 1 hit. |
| PROSITE | PS00666. DHDPS_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | A5CSM7_CLAM3 | ||||||||
| Accession | Primary (citable) accession number: A5CSM7 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||
