A5CS47 (A5CS47_CLAM3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL CAN01911.1

Gene names

Ordered Locus Names:

CMM_1855

Organism

Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) [Complete proteome] [HAMAP] EMBL CAN01911.1

Taxonomic identifier

443906 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length	243 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. PIRSR PIRSR004848-1
Sequence similarities	Belongs to the UPF0001 family. RuleBase RU004514

Ontologies

Keywords
Ligand	Pyridoxal phosphate PIRSR PIRSR004848-1
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Amino acid modifications
	Modified residue	56	1	N6-(pyridoxal phosphate)lysine By similarity PIRSR PIRSR004848-1

Sequences

	Sequence		Length	Mass (Da)
	A5CS47 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 91E5B2FBF56A667B	FASTA	243	25,668
	10 20 30 40 50 60 MTDAPLTGGA HASDAHPDEA HPGLAERWAS VQADVADGIR AAGRRPDEVT TIVVTKFQPV 70 80 90 100 110 120 SLLRALVELG VRDLGESRHQ EAQGKAAELE GTGVAWHFVG QLQGKKARQV RRYASVIHSV 130 140 150 160 170 180 DRPSLVDALA SDEQETRVFL QVNLTDDDGR GGVRPAEAEA LAEHAAAASG IRVLGVMAVA 190 200 210 220 230 240 PDDGEPRRAF ARLRGISDDV RRILPGARAI SAGMSGDLRE ALLEGATHLR IGSAITGKRP DGP

References

[1]

"The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity." Gartemann K.-H., Abt B., Bekel T., Burger A., Engemann J., Fluegel M., Gaigalat L., Goesmann A., Graefen I., Kalinowski J., Kaup O., Kirchner O., Krause L., Linke B., McHardy A., Meyer F., Pohle S., Rueckert C. , Schneiker S., Zellermann E.-M., Puehler A., Eichenlaub R., Kaiser O., Bartels D. J. Bacteriol. 190:2138-2149(2008) [PubMed: 18192381] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM711867 Genomic DNA. Translation: CAN01911.1.
RefSeq	YP_001222597.1. NC_009480.1.
3D structure databases
ProteinModelPortal	A5CS47.
ModBase	Search...
Protein-protein interaction databases
STRING	A5CS47.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5174861.
GenomeReviews	Gene locus CMM_1855 in contig AM711867_GR.
KEGG	cmi:CMM_1855.
PATRIC	21454535. VBIClaMic82482_1977.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0325.
HOGENOM	HBG289671.
OMA	AENREQE.
ProtClustDB	CLSK831333.
Family and domain databases
InterPro	IPR001608. Ala_racemase_N. IPR011078. UPF0001. [Graphical view]
KO	K06997.
PANTHER	PTHR10146. PP_YBL036C. 1 hit.
Pfam	PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PIRSF	PIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMs	TIGR00044. TIGR00044. 1 hit.
PROSITE	PS01211. UPF0001. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5CS47_CLAM3

Accession

Primary (citable) accession number: A5CS47

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)