A5CRT8 (A5CRT8_CLAM3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414

Gene names

Name:	sodA EMBL CAN01801.1
Ordered Locus Names:	CMM_1745 EMBL CAN01801.1

Organism

Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) [Complete proteome] [HAMAP] EMBL CAN01801.1

Taxonomic identifier

443906 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter › Clavibacter michiganensis › Clavibacter michiganensis subsp. michiganensis

Protein attributes

Sequence length	208 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414
Sequence similarities	Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU000414 EMBL CAN01801.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5CRT8 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 7B952E169E05963B	FASTA	208	23,250
	10 20 30 40 50 60 MADYTLVDLP YDYSALEPSI SGRIMELHHD KHHKTYVDGA NTALVKLQEA RDAGDLTFVN 70 80 90 100 110 120 KLQKDLAFNL AGHVNHTVFW NNLSPDGGDK PTGELAAAID EFFGSYDKFQ AHFTASALGI 130 140 150 160 170 180 QGSGWSILAW DSLGQKLIIE QLYDHQGNLA AATVPILLLD MWEHAFYLDY VNVKADYVKA 190 200 FWNIVNWADV QARFDAARTK TQGLFLLS

References

[1]

"The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity." Gartemann K.H., Abt B., Bekel T., Burger A., Engemann J., Flugel M., Gaigalat L., Goesmann A., Grafen I., Kalinowski J., Kaup O., Kirchner O., Krause L., Linke B., McHardy A., Meyer F., Pohle S., Ruckert C. , Schneiker S., Zellermann E.M., Puhler A., Eichenlaub R., Kaiser O., Bartels D. J. Bacteriol. 190:2138-2149(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NCPPB 382 EMBL CAN01801.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM711867 Genomic DNA. Translation: CAN01801.1.
RefSeq	YP_001222488.1. NC_009480.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	443906.CMM_1745.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAN01801; CAN01801; CMM_1745.
GeneID	5175066.
KEGG	cmi:CMM_1745.
PATRIC	21454301. VBIClaMic82482_1865.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0605.
HOGENOM	HOG000013583.
KO	K04564.
OMA	AVDKHDQ.
ProtClustDB	CLSK928315.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
PROSITE	PS00088. SOD_MN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5CRT8_CLAM3

Accession

Primary (citable) accession number: A5CRT8

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	May 1, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)