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Protein

Uridylate kinase

Gene

pyrH

Organism
Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalyzes the reversible phosphorylation of UMP to UDP.UniRule annotation

Catalytic activityi

ATP + UMP = ADP + UDP.UniRule annotation

Enzyme regulationi

Inhibited by UTP.UniRule annotation

Pathwayi: CTP biosynthesis via de novo pathway

This protein is involved in step 1 of the subpathway that synthesizes UDP from UMP (UMPK route).UniRule annotation
Proteins known to be involved in this subpathway in this organism are:
  1. Uridylate kinase (pyrH)
This subpathway is part of the pathway CTP biosynthesis via de novo pathway, which is itself part of Pyrimidine metabolism.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes UDP from UMP (UMPK route), the pathway CTP biosynthesis via de novo pathway and in Pyrimidine metabolism.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei53UMP; via amide nitrogenUniRule annotation1
Binding sitei54ATP; via amide nitrogenUniRule annotation1
Binding sitei58ATPUniRule annotation1
Binding sitei73UMPUniRule annotation1
Binding sitei162ATPUniRule annotation1
Binding sitei168ATP; via amide nitrogen and carbonyl oxygenUniRule annotation1
Binding sitei171ATPUniRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi13 – 16ATPUniRule annotation4
Nucleotide bindingi134 – 141UMPUniRule annotation8

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionKinase, Transferase
Biological processPyrimidine biosynthesis
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

UniPathwayiUPA00159; UER00275

Names & Taxonomyi

Protein namesi
Recommended name:
Uridylate kinaseUniRule annotation (EC:2.7.4.22UniRule annotation)
Short name:
UKUniRule annotation
Alternative name(s):
Uridine monophosphate kinaseUniRule annotation
Short name:
UMP kinaseUniRule annotation
Short name:
UMPKUniRule annotation
Gene namesi
Name:pyrHUniRule annotation
Ordered Locus Names:CMM_1385
OrganismiClavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Taxonomic identifieri443906 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesMicrobacteriaceaeClavibacter
Proteomesi
  • UP000001564 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003238261 – 238Uridylate kinaseAdd BLAST238

Proteomic databases

PRIDEiA5CQS6

Interactioni

Subunit structurei

Homohexamer.UniRule annotation

Protein-protein interaction databases

STRINGi443906.CMM_1385

Structurei

3D structure databases

ProteinModelPortaliA5CQS6
SMRiA5CQS6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UMP kinase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C41 Bacteria
COG0528 LUCA
HOGENOMiHOG000047187
KOiK09903
OMAiPIIVFDM

Family and domain databases

Gene3Di3.40.1160.10, 1 hit
HAMAPiMF_01220_B PyrH_B, 1 hit
InterProiView protein in InterPro
IPR036393 AceGlu_kinase-like_sf
IPR001048 Asp/Glu/Uridylate_kinase
IPR011817 Uridylate_kinase
IPR015963 Uridylate_kinase_bac
PfamiView protein in Pfam
PF00696 AA_kinase, 1 hit
PIRSFiPIRSF005650 Uridylate_kin, 1 hit
SUPFAMiSSF53633 SSF53633, 1 hit
TIGRFAMsiTIGR02075 pyrH_bact, 1 hit

Sequencei

Sequence statusi: Complete.

A5CQS6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDQTTTRRV LLKLSGESFG GGQMGVDPDV VSALAREIAE AAKTVEVAIV
60 70 80 90 100
VGGGNFFRGA QLSQRGMDRG RADYMGMLGT VMNALALQDF LEQAGAATRV
110 120 130 140 150
QSAISMTQVA EPYIPRRAVR HLEKGRIVIF GAGAGLPYFS TDTVAAQRAL
160 170 180 190 200
EIQAVEVLVA KNGVDGVYTG DPRTDPSATL LDTVTYQDAL QRGLKVVDST
210 220 230
AFSLCMDNDM KMVVFGMEPG GNVTRAIRGE RIGTIVSN
Length:238
Mass (Da):25,307
Last modified:June 12, 2007 - v1
Checksum:i299E0F34C190E92B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM711867 Genomic DNA Translation: CAN01430.1
RefSeqiWP_012038071.1, NC_009480.1

Genome annotation databases

EnsemblBacteriaiCAN01430; CAN01430; CMM_1385
KEGGicmi:CMM_1385

Similar proteinsi

Entry informationi

Entry nameiPYRH_CLAM3
AccessioniPrimary (citable) accession number: A5CQS6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 18, 2008
Last sequence update: June 12, 2007
Last modified: May 23, 2018
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

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