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A5CQS5 (RS2_CLAM3) Reviewed, UniProtKB/Swiss-Prot

Last modified December 14, 2011. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S2
Gene names
Name:rpsB
Ordered Locus Names:CMM_1383
OrganismClavibacter michiganensis subsp. michiganensis (strain NCPPB 382) [Complete proteome] [HAMAP]
Taxonomic identifier443906 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length315 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S2P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular componentsmall ribosomal subunit

Inferred from electronic annotation. Source: InterPro

   Molecular functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 31531530S ribosomal protein S2 HAMAP MF_00291_B
PRO_1000003932

Sequences

Sequence LengthMass (Da)Tools
A5CQS5 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 7BC4E4D0B918065D

FASTA31535,020
        10         20         30         40         50         60 
MAVVTIRQLL DCGVHFGHPK TRWNPKMKRF IFTERSGIYI IDLQQSLALI DKAYDFVKET 

        70         80         90        100        110        120 
VAHGGTILFV GTKKQAQESI AEQAQRVGQP YVNQRWLGGL LTNFQTVHKR LNRLKELDLV 

       130        140        150        160        170        180 
DFDDTTRGFT KKELLIQRRE RDKLEKSLGG IRNLTKTPSA MWVVDTKKEH LAIDEARKLG 

       190        200        210        220        230        240 
IPVIGILDTN CDPDEVQYPI PGNDDAIRSV ALLTRIIADA AAEGLIQRHQ KPDAEGSAPA 

       250        260        270        280        290        300 
EPLADWEREL LEQGDAAKAE LPVEENDVDA EVSAKNEAKS EDEVAAPVHA PESDDATEAK 

       310 
IEAEATESEK APVSE

« Hide

References

[1]"The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity."
Gartemann K.-H., Abt B., Bekel T., Burger A., Engemann J., Fluegel M., Gaigalat L., Goesmann A., Graefen I., Kalinowski J., Kaup O., Kirchner O., Krause L., Linke B., McHardy A., Meyer F., Pohle S., Rueckert C. expand/collapse author list , Schneiker S., Zellermann E.-M., Puehler A., Eichenlaub R., Kaiser O., Bartels D.
J. Bacteriol. 190:2138-2149(2008) [PubMed: 18192381] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NCPPB 382.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM711867 Genomic DNA. Translation: CAN01428.1.
RefSeqYP_001222124.1. NC_009480.1.

3D structure databases

ProteinModelPortalA5CQS5.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5CQS5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5173737.
GenomeReviewsGene locus CMM_1383 in contig AM711867_GR.
KEGGcmi:CMM_1383.
PATRIC21453537. VBIClaMic82482_1492.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0052.
HOGENOMHBG736296.
OMAKQAQDSV.
ProtClustDBPRK05299.

Enzyme and pathway databases

BioCycCMIC443906:CMM_1383-MONOMER.

Family and domain databases

HAMAPMF_00291_B. Ribosomal_S2_B.
[Tree]
InterProIPR001865. Ribosomal_S2.
IPR005706. Ribosomal_S2_bac/mit/plastid.
IPR018130. Ribosomal_S2_CS.
IPR023591. Ribosomal_S2_flav_dom.
[Graphical view]
KOK02967.
PANTHERPTHR12534. Ribosom_S2_bac. 1 hit.
PfamPF00318. Ribosomal_S2. 1 hit.
[Graphical view]
PRINTSPR00395. RIBOSOMALS2.
SUPFAMSSF52313. Ribosomal_S2. 1 hit.
TIGRFAMsTIGR01011. RpsB_bact. 1 hit.
PROSITEPS00962. RIBOSOMAL_S2_1. 1 hit.
PS00963. RIBOSOMAL_S2_2. False negative.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRS2_CLAM3
AccessionPrimary (citable) accession number: A5CQS5
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: June 12, 2007
Last modified: December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Ribosomal proteins

Ribosomal proteins families and list of entries

SIMILARITY comments

Index of protein domains and families

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