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A5CQS1 (EFTS_CLAM3) Reviewed, UniProtKB/Swiss-Prot

Last modified December 14, 2011. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Ts
Short name=EF-Ts
Gene names
Name:tsf
Ordered Locus Names:CMM_1384
OrganismClavibacter michiganensis subsp. michiganensis (strain NCPPB 382) [Complete proteome] [HAMAP]
Taxonomic identifier443906 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length275 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. HAMAP MF_00050

Subcellular location

Cytoplasm HAMAP MF_00050.

Sequence similarities

Belongs to the EF-Ts family.

Ontologies

Keywords
   Biological processProtein biosynthesis
   Cellular componentCytoplasm
   Molecular functionElongation factor
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functiontranslation elongation factor activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 275275Elongation factor Ts HAMAP MF_00050
PRO_1000006075

Regions

Region80 – 834Involved in Mg(2+) ion dislocation from EF-Tu By similarity

Sequences

Sequence LengthMass (Da)Tools
A5CQS1 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: D3468EDB249B6BFD

FASTA27529,287
        10         20         30         40         50         60 
MANFTAADVK ELRDRLGAGM MDSKNALVEA DGDIEKAIEI LRLKGQKGNA KRGDRSTAEG 

        70         80         90        100        110        120 
LVAASTQDGA ATLIELACET DFVAKNDKFI ALSESVLAAV VAAGASTVEE ALQAPAGEQT 

       130        140        150        160        170        180 
VDQLISDQAA ILGEKIALRR VARLAGEHQE VYLHRTSKDL PPQVGVVVDY SGTDAETARS 

       190        200        210        220        230        240 
IAQHIAFANP EYLAREDVPA DKVEAERAIV TEISRNEGKP EAALPKIIEG RLTGFFKQVA 

       250        260        270 
LLEQDYAKDN KQSVKKVVEA AGLTVTGFAR FKVGA

« Hide

References

[1]"The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity."
Gartemann K.-H., Abt B., Bekel T., Burger A., Engemann J., Fluegel M., Gaigalat L., Goesmann A., Graefen I., Kalinowski J., Kaup O., Kirchner O., Krause L., Linke B., McHardy A., Meyer F., Pohle S., Rueckert C. expand/collapse author list , Schneiker S., Zellermann E.-M., Puehler A., Eichenlaub R., Kaiser O., Bartels D.
J. Bacteriol. 190:2138-2149(2008) [PubMed: 18192381] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NCPPB 382.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM711867 Genomic DNA. Translation: CAN01429.1.
RefSeqYP_001222125.1. NC_009480.1.

3D structure databases

ProteinModelPortalA5CQS1.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5CQS1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5175713.
GenomeReviewsGene locus CMM_1384 in contig AM711867_GR.
KEGGcmi:CMM_1384.
PATRIC21453539. VBIClaMic82482_1493.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0264.
HOGENOMHBG713289.
OMAYLHGTRI.
ProtClustDBPRK09377.

Enzyme and pathway databases

BioCycCMIC443906:CMM_1384-MONOMER.

Family and domain databases

HAMAPMF_00050. EF_Ts.
[Tree]
InterProIPR001816. Transl_elong_EFTs/EF1B.
IPR014039. Transl_elong_EFTs/EF1B_dimer.
IPR009060. UBA-like.
IPR000449. UBA/transl_elong_EF1B_N.
[Graphical view]
Gene3DG3DSA:3.30.479.20. Transl_elong_EFTs/EF1B_dimer. 3 hits.
KOK02357.
PANTHERPTHR11741. Transl_elong_EFTs/EF1B. 1 hit.
PfamPF00889. EF_TS. 1 hit.
PF00627. UBA. 1 hit.
[Graphical view]
SUPFAMSSF54713. EF_TS. 1 hit.
SSF46934. UBA_like. 1 hit.
TIGRFAMsTIGR00116. Tsf. 1 hit.
PROSITEPS01126. EF_TS_1. False negative.
PS01127. EF_TS_2. False negative.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameEFTS_CLAM3
AccessionPrimary (citable) accession number: A5CQS1
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: June 12, 2007
Last modified: December 14, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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