A5CQP8 (RL32_CLAM3) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L32

Gene names

Name:	rpmF
Ordered Locus Names:	CMM_1357

Organism

Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) [Complete proteome] [HAMAP]

Taxonomic identifier

443906 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter › Clavibacter michiganensis › Clavibacter michiganensis subsp. michiganensis

Protein attributes

Sequence length	67 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L32P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 67	67	50S ribosomal protein L32 HAMAP-Rule MF_00340		PRO_1000005056

Sequences

	Sequence		Length	Mass (Da)
	A5CQP8 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 08B3B133CC6C4A6D	FASTA	67	7,619
	10 20 30 40 50 60 MAVPKRKMSR SNTRARRSQW KAEAPTLVKT IENGKVVYSM PHRARVVEDA AGTPLYMEYK GRKVADV

References

[1]

"The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity." Gartemann K.-H., Abt B., Bekel T., Burger A., Engemann J., Fluegel M., Gaigalat L., Goesmann A., Graefen I., Kalinowski J., Kaup O., Kirchner O., Krause L., Linke B., McHardy A., Meyer F., Pohle S., Rueckert C. , Schneiker S., Zellermann E.-M., Puehler A., Eichenlaub R., Kaiser O., Bartels D. J. Bacteriol. 190:2138-2149(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NCPPB 382.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM711867 Genomic DNA. Translation: CAN01402.1.
RefSeq	YP_001222098.1. NC_009480.1.
3D structure databases
ProteinModelPortal	A5CQP8.
ModBase	Search...
Protein-protein interaction databases
STRING	443906.CMM_1357.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAN01402; CAN01402; CMM_1357.
GeneID	5174867.
KEGG	cmi:CMM_1357.
PATRIC	21453485. VBIClaMic82482_1466.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG303978.
HOGENOM	HOG000040268.
KO	K02911.
OMA	NALFLEY.
ProtClustDB	PRK01110.
Family and domain databases
HAMAP	MF_00340. Ribosomal_L32.
InterPro	IPR002677. Ribosomal_L32p. IPR011332. Ribosomal_zn-bd_dom. [Graphical view]
Pfam	PF01783. Ribosomal_L32p. 1 hit. [Graphical view]
SUPFAM	SSF57829. Ribosomal_zn-bd. 1 hit.
TIGRFAMs	TIGR01031. rpmF_bact. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RL32_CLAM3

Accession

Primary (citable) accession number: A5CQP8

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	June 12, 2007
Last modified:	May 1, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program