A5CQL3 (A5CQL3_CLAM3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-oxoglutarate dehydrogenase E1 component EMBL CAN01367.1
EC=1.2.4.2 EMBL CAN01367.1

Gene names

Name:	sucA EMBL CAN01367.1
Ordered Locus Names:	CMM_1322

Organism

Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) [Complete proteome] [HAMAP] EMBL CAN01367.1

Taxonomic identifier

443906 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length	1272 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the 2-oxoacid dehydrogenase family. RuleBase RU003423

Ontologies

Keywords
Ligand	Thiamine pyrophosphate SAAS SAAS001017
Molecular function	Oxidoreductase EMBL CAN01367.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: EC thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro transferase activity, transferring acyl groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5CQL3 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 63F021E78D749E31	FASTA	1,272	139,979
	10 20 30 40 50 60 MSSQVTGTGT DDGSTGDFGA NEWLVDEMYE RFVVDKDSVD RSWWPILENY YTTVIEGREA 70 80 90 100 110 120 TPATGEQTAE AQIPDPSGTS APASTNTGSP APTPAPASAG QPDAQAQQPA TGSQPAARTT 130 140 150 160 170 180 SIAPKQQPIP AQAPAKAPAK KGAEPTPPGE DEVSPLRGMA KSLATNMDAS LTIPTATSVR 190 200 210 220 230 240 TIPAKLMIDN RIVINNHLKR ARGGKVSFTH LIGWALIQAL KEFPSQNVHY DEVDGKPSVV 250 260 270 280 290 300 SPAHINLGIA IDMPKPDGTR ALLVPSIKGA EAMTFGEFLS AYEDLVKKAR SNKLAAGDFA 310 320 330 340 350 360 GTTISLTNPG GIGTVHSVPR LMKGQGAIIG AGALEYPAEF QGSSPKTLVE LGIGKTITLT 370 380 390 400 410 420 STYDHRVIQG AGSGEFLKIV HERLIGQHGF YEDIFAALRI PYDPIQWATD INVDLSERVS 430 440 450 460 470 480 KTSRVQELIN AYRVRGHLMA DIDPLEYQQR THPDLEITNH GLTFWDLDRE FVTDGFGGRR 490 500 510 520 530 540 QALLRDVLGI LRDSYCRTIG IEYMHIQQPD ERRWIQGKVE QPYAKPTHDE QMRILSKLNE 550 560 570 580 590 600 SEAFETFLQT KYVGQKRFSL EGGESTISLL DTLLQGAADH GLDEVAIGMA HRGRLNVLTN 610 620 630 640 650 660 IAGKSYGQIF REFEGTQDPR TVQGSGDVKY HLGTEGTFRG VHGEEMPVYL AANPSHLEAV 670 680 690 700 710 720 NGVLEGIVRA KQDRKPIGSF SVLPILVHGD ASMAGQGVVF ETLQLSQLRA YRTGGTVHIV 730 740 750 760 770 780 INNQVGFTTP PSESRSSVYS TDVAKSIQAP IFHVNGDDPE AVARVAHLAF EFRQEFKKDV 790 800 810 820 830 840 VIDLVCYRRR GHNEGDDPSM TQPLMYNLIE AKRSVRKLYT EALVGRGDIT QEEYDAAQKD 850 860 870 880 890 900 FQDRLERAFA ETHAAQTSSI PIQTQDAGAV ADLERPDSQQ DDGHGEPETT GVSESVIQTI 910 920 930 940 950 960 GDAHDNPPQG FSVHPKLQAL MRKRLEMSRS GSIDWAFGEL LAIGSLLLEN TPVRLAGQDS 970 980 990 1000 1010 1020 RRGTFVQRHA VLHDRDNGQE WLPLANLSDR QARFWIYDTL LSEYAAMGFE YGYSVERPDA 1030 1040 1050 1060 1070 1080 LVLWEAQFGD FANGAQTIID EFISSAEQKW GQRSSVVLLL PHGYEGQGPD HSSARIERFL 1090 1100 1110 1120 1130 1140 QLCAEQNMTV ARPSTPASYF HLLRRQAYSR PRRPLVVFTP KAMLRLRGAT SDVEAFTSGR 1150 1160 1170 1180 1190 1200 FEPVIDDVRI QDRGAVRRVL LHSGKVHYDL LGELEKRQDT SIALVRLEQF YPFPEEQVRR 1210 1220 1230 1240 1250 1260 VVESYPDAEV VWVQDEPENQ GAWPFVHVEL GRVIPDRQVR VVSRPAAASP AAGSSKRHAT 1270 EQTDLIARAT AE

References

[1]

"The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity." Gartemann K.-H., Abt B., Bekel T., Burger A., Engemann J., Fluegel M., Gaigalat L., Goesmann A., Graefen I., Kalinowski J., Kaup O., Kirchner O., Krause L., Linke B., McHardy A., Meyer F., Pohle S., Rueckert C. , Schneiker S., Zellermann E.-M., Puehler A., Eichenlaub R., Kaiser O., Bartels D. J. Bacteriol. 190:2138-2149(2008) [PubMed: 18192381] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM711867 Genomic DNA. Translation: CAN01367.1.
RefSeq	YP_001222063.1. NC_009480.1.
3D structure databases
ProteinModelPortal	A5CQL3.
ModBase	Search...
Protein-protein interaction databases
STRING	A5CQL3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5174369.
GenomeReviews	Gene locus CMM_1322 in contig AM711867_GR.
KEGG	cmi:CMM_1322.
PATRIC	21453413. VBIClaMic82482_1430.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0567.
HOGENOM	HBG289950.
OMA	EGDEPAF.
ProtClustDB	PRK12270.
Family and domain databases
InterPro	IPR001078. 2-oxoacid_DH_actylTfrase. IPR011603. 2oxoglutarate_DH_E1. IPR023213. CAT-like_dom. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
Gene3D	G3DSA:3.30.559.10. CAT-like_dom. 1 hit.
KO	K00164.
PANTHER	PTHR23152. 2oxoglutarate_DH_E1. 1 hit.
Pfam	PF00198. 2-oxoacid_dh. 1 hit. PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5CQL3_CLAM3

Accession

Primary (citable) accession number: A5CQL3

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)