A5CQI6 (A5CQI6_CLAM3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glutamate racemase HAMAP MF_00258
EC=5.1.1.3 HAMAP MF_00258

Gene names

Name:	murI HAMAP MF_00258 EMBL CAN01339.1
Ordered Locus Names:	CMM_1294

Organism

Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) [Complete proteome] [HAMAP] EMBL CAN01339.1

Taxonomic identifier

443906 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length	294 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Provides the (R)-glutamate required for cell wall biosynthesis By similarity. HAMAP MF_00258 SAAS SAAS015942
Catalytic activity	L-glutamate = D-glutamate. HAMAP MF_00258 SAAS SAAS015942
Pathway	Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_00258 SAAS SAAS015942
Sequence similarities	Belongs to the aspartate/glutamate racemases family. HAMAP MF_00258

Ontologies

Keywords
Biological process	Cell shape Cell wall biogenesis/degradation HAMAP MF_00258 SAAS SAAS015942 Peptidoglycan synthesis HAMAP MF_00258 SAAS SAAS015942
Molecular function	Isomerase HAMAP MF_00258 SAAS SAAS015942 EMBL CAN01339.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular cell wall organization Inferred from electronic annotation. Source: UniProtKB-KW peptidoglycan biosynthetic process Inferred from electronic annotation. Source: HAMAP regulation of cell shape Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	glutamate racemase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5CQI6 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 204B971BFF20DDF9	FASTA	294	30,834
	10 20 30 40 50 60 MSDAPIGIFD SGVGGLTVAR AVATLLPRES ITYIGDTAHT PYGDKPIADV RRYALAVLDD 70 80 90 100 110 120 LVERGVKMLV IACNTASAAM LRDARERYDI PVVEVIQPAV RTAVSVTRNH RVGVIATHAT 130 140 150 160 170 180 VTSRAYDDAF AAAPHLELTS AEAPDFVAFV ERGVTSGPEL MAAAEGYLAP LRAAGIDTLV 190 200 210 220 230 240 LGCTHYPFLE GAISLLMGPD VTLVSSDTET AKDVYRELVS AGLERRSDAP PVIRYEATGG 250 260 270 280 290 SASDFETLAH RMLGSGVTHV ELVETGAISL PHRPRDGASA ASPADGTPST PDPS

References

[1]

"The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity." Gartemann K.-H., Abt B., Bekel T., Burger A., Engemann J., Fluegel M., Gaigalat L., Goesmann A., Graefen I., Kalinowski J., Kaup O., Kirchner O., Krause L., Linke B., McHardy A., Meyer F., Pohle S., Rueckert C. , Schneiker S., Zellermann E.-M., Puehler A., Eichenlaub R., Kaiser O., Bartels D. J. Bacteriol. 190:2138-2149(2008) [PubMed: 18192381] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM711867 Genomic DNA. Translation: CAN01339.1.
RefSeq	YP_001222035.1. NC_009480.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A5CQI6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5174688.
GenomeReviews	Gene locus CMM_1294 in contig AM711867_GR.
KEGG	cmi:CMM_1294.
PATRIC	21453353. VBIClaMic82482_1401.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0796.
HOGENOM	HBG645102.
OMA	PQEDTIY.
ProtClustDB	PRK00865.
Family and domain databases
HAMAP	MF_00258. Glu_racemase. [Tree]
InterPro	IPR015942. Asp/Glu/hydantoin_racemase. IPR001920. Asp/Glu_race. IPR018187. Asp/Glu_racemase_AS. IPR004391. Glu_race. [Graphical view]
Gene3D	G3DSA:3.40.50.1860. Asp/Glu_race. 1 hit.
KO	K01776.
PANTHER	PTHR21198. PTHR21198. 1 hit.
Pfam	PF01177. Asp_Glu_race. 1 hit. [Graphical view]
SUPFAM	SSF53681. Asp/Glu_race. 2 hits.
TIGRFAMs	TIGR00067. Glut_race. 1 hit.
PROSITE	PS00923. ASP_GLU_RACEMASE_1. 1 hit. PS00924. ASP_GLU_RACEMASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5CQI6_CLAM3

Accession

Primary (citable) accession number: A5CQI6

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)