A5CPM1 (A5CPM1_CLAM3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DeoA protein EMBL CAN01020.1
EC=2.4.2.4 EMBL CAN01020.1

Gene names

Name:	deoA EMBL CAN01020.1
Ordered Locus Names:	CMM_0981

Organism

Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) [Complete proteome] [HAMAP] EMBL CAN01020.1

Taxonomic identifier

443906 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length	432 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosyltransferase SAAS SAAS018090 EMBL CAN01020.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pyrimidine base metabolic process Inferred from electronic annotation. Source: InterPro pyrimidine nucleoside metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	pyrimidine-nucleoside phosphorylase activity Inferred from electronic annotation. Source: InterPro thymidine phosphorylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5CPM1 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: FDD7FCE05FAA571F	FASTA	432	45,646
	10 20 30 40 50 60 MSAAFDVVDL IRTKRDGGRL STAEIDWLVA AYTDRYVADE QMAALAMAIL LRGMDRAEIR 70 80 90 100 110 120 DLTLAMIASG ETLDFSQLGK PTVDKHSTGG VGDKITLPLM PLVASYGVAV PQLSGRGLGH 130 140 150 160 170 180 TGGTLDKLES IPGWRADLST EEMVRQMQDH GGVICAAGSG LAPADKRLYA LRDTTGTVEA 190 200 210 220 230 240 IPLIASSIMS KKIAEGTGAL VLDVKFGSGA FMTDIDRSRE LARTMVELGT DAGVRTTALL 250 260 270 280 290 300 TDMDVPLGLA IGNANEVRES VEVLAGGGPA DVVELTLALA REMLAAVGIP DADVEVALRD 310 320 330 340 350 360 GRAMDAWRAT VRAQGGDPDA AMPVARETHV VTAERDGVLV QQDALPFGIA AWRLGAGRAR 370 380 390 400 410 420 QGDAVQHAAG VDLHAKPGDR VRRGDPLFTL STDEPERFAR ALESLEGAYR VGDPEEHVAR 430 GPLVRERITA EG

References

[1]

"The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity." Gartemann K.-H., Abt B., Bekel T., Burger A., Engemann J., Fluegel M., Gaigalat L., Goesmann A., Graefen I., Kalinowski J., Kaup O., Kirchner O., Krause L., Linke B., McHardy A., Meyer F., Pohle S., Rueckert C. , Schneiker S., Zellermann E.-M., Puehler A., Eichenlaub R., Kaiser O., Bartels D. J. Bacteriol. 190:2138-2149(2008) [PubMed: 18192381] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM711867 Genomic DNA. Translation: CAN01020.1.
RefSeq	YP_001221722.1. NC_009480.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A5CPM1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5175072.
GenomeReviews	Gene locus CMM_0981 in contig AM711867_GR.
KEGG	cmi:CMM_0981.
PATRIC	21452703. VBIClaMic82482_1080.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0213.
HOGENOM	HBG288505.
OMA	VARETHV.
ProtClustDB	PRK05820.
Family and domain databases
InterPro	IPR000312. Glycosyl_Trfase_fam3. IPR017459. Glycosyl_Trfase_fam3_N. IPR020072. Glycosyl_Trfase_fam3_subgr_N. IPR013102. PYNP_C. IPR018090. Pyrmidine_PPas_bac/euk. IPR000053. Pyrmidine_PPase. IPR017872. Pyrmidine_PPase_CS. [Graphical view]
Gene3D	G3DSA:3.90.1170.30. G3DSA:3.90.1170.30. 1 hit. G3DSA:1.20.970.10. Glyco_trans_3. 1 hit. G3DSA:3.40.1030.10. Glyco_trans_3. 1 hit.
KO	K00758.
PANTHER	PTHR10515. Pyrmidine_PPase. 1 hit.
Pfam	PF02885. Glycos_trans_3N. 1 hit. PF00591. Glycos_transf_3. 1 hit. PF07831. PYNP_C. 1 hit. [Graphical view]
PIRSF	PIRSF000478. TP_PyNP. 1 hit.
SMART	SM00941. PYNP_C. 1 hit. [Graphical view]
SUPFAM	SSF47648. Glyco_trans_3. 1 hit. SSF52418. Glyco_trans_3. 1 hit. SSF54680. PYNP_C. 1 hit.
TIGRFAMs	TIGR02644. Y_phosphoryl. 1 hit.
PROSITE	PS00647. THYMID_PHOSPHORYLASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5CPM1_CLAM3

Accession

Primary (citable) accession number: A5CPM1

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)