A5CPE6 (A5CPE6_CLAM3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Thymidine kinase RuleBase RU000544
EC=2.7.1.21 RuleBase RU000544

Gene names

Name:	tdkA EMBL CAN00944.1
Ordered Locus Names:	CMM_0907 EMBL CAN00944.1

Organism

Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) [Complete proteome] [HAMAP] EMBL CAN00944.1

Taxonomic identifier

443906 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter › Clavibacter michiganensis › Clavibacter michiganensis subsp. michiganensis

Protein attributes

Sequence length	224 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + thymidine = ADP + thymidine 5'-phosphate. RuleBase RU000544
Sequence similarities	Belongs to the thymidine kinase family. RuleBase RU004165

Ontologies

Keywords
Biological process	DNA synthesis RuleBase RU000544
Ligand	ATP-binding RuleBase RU000544 Nucleotide-binding
Molecular function	Kinase RuleBase RU000544 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA replication Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW thymidine kinase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5CPE6 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 443E64749A6D142C	FASTA	224	24,714
	10 20 30 40 50 60 MAKLYFRFGA MNSGKSTSML QAAYNYEERG QHVLLTKPVI DTKGDRDIVS RLGVRRPVDF 70 80 90 100 110 120 LLEPDADVWQ EFGIHRERVL LEKGGPTACL LVDEAQFLRE SQVDDLLRIA ILQDVPVIAY 130 140 150 160 170 180 GIRTDFQTVA FPGSRRLLEI AHSLEEMKTI CRCGRKAVFN ARQVGERFIF AGDQVAIDGE 190 200 210 220 DVTYMSLCGA CYLAESGGVL TSGRPVEASA SPFGYPAGPD ADFA

References

[1]

"The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity." Gartemann K.H., Abt B., Bekel T., Burger A., Engemann J., Flugel M., Gaigalat L., Goesmann A., Grafen I., Kalinowski J., Kaup O., Kirchner O., Krause L., Linke B., McHardy A., Meyer F., Pohle S., Ruckert C. , Schneiker S., Zellermann E.M., Puhler A., Eichenlaub R., Kaiser O., Bartels D. J. Bacteriol. 190:2138-2149(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NCPPB 382 EMBL CAN00944.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM711867 Genomic DNA. Translation: CAN00944.1.
RefSeq	YP_001221647.1. NC_009480.1.
3D structure databases
ProteinModelPortal	A5CPE6.
ModBase	Search...
Protein-protein interaction databases
STRING	443906.CMM_0907.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAN00944; CAN00944; CMM_0907.
GeneID	5173379.
KEGG	cmi:CMM_0907.
PATRIC	21452543. VBIClaMic82482_1002.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1435.
HOGENOM	HOG000076391.
KO	K00857.
OMA	FRYGAMN.
ProtClustDB	PRK04296.
Enzyme and pathway databases
BioCyc	CMIC443906:GCI2-934-MONOMER.
Family and domain databases
InterPro	IPR027417. P-loop_NTPase. IPR001267. Thymidine_kinase. [Graphical view]
PANTHER	PTHR11441. PTHR11441. 1 hit.
Pfam	PF00265. TK. 1 hit. [Graphical view]
PIRSF	PIRSF035805. TK_cell. 1 hit.
SUPFAM	SSF52540. SSF52540. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5CPE6_CLAM3

Accession

Primary (citable) accession number: A5CPE6

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	May 29, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)