A5CP99 (A5CP99_CLAM3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L10 HAMAP MF_00362 RuleBase RU003636

Gene names

Name:	rplJ HAMAP MF_00362 EMBL CAN00896.1
Ordered Locus Names:	CMM_0860

Organism

Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) [Complete proteome] [HAMAP] EMBL CAN00896.1

Taxonomic identifier

443906 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length	171 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L10P family. HAMAP MF_00362 RuleBase RU003635

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP MF_00362 RuleBase RU004210 SAAS SAAS002363 EMBL CAN00896.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	ribosome biogenesis Inferred from electronic annotation. Source: InterPro translation Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5CP99 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 580707E23D53670A	FASTA	171	18,176
	10 20 30 40 50 60 MANKEASVAE LAEKFRSSNA VLLTEYRGLT VAQLKQLRKS ISADATYAVV KNTLTKIAAN 70 80 90 100 110 120 QAGISSFDDE LVGPSAIAFV HGDTVAVAKA LRTFTKANPL LVVKGGYFDG NPLTADEVNK 130 140 150 160 170 LADLESREVL LGKLAGAFKA SLFGAAYLFN APLSQAVRTV EALREKQESA Q

References

[1]

"The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity." Gartemann K.-H., Abt B., Bekel T., Burger A., Engemann J., Fluegel M., Gaigalat L., Goesmann A., Graefen I., Kalinowski J., Kaup O., Kirchner O., Krause L., Linke B., McHardy A., Meyer F., Pohle S., Rueckert C. , Schneiker S., Zellermann E.-M., Puehler A., Eichenlaub R., Kaiser O., Bartels D. J. Bacteriol. 190:2138-2149(2008) [PubMed: 18192381] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM711867 Genomic DNA. Translation: CAN00896.1.
RefSeq	YP_001221600.1. NC_009480.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A5CP99.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5172929.
GenomeReviews	Gene locus CMM_0860 in contig AM711867_GR.
KEGG	cmi:CMM_0860.
PATRIC	21452447. VBIClaMic82482_0955.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0244.
HOGENOM	HBG597359.
OMA	ANDKFEI.
ProtClustDB	PRK00099.
Family and domain databases
HAMAP	MF_00362. Ribosomal_L10. [Tree]
InterPro	IPR022973. Ribosomal_L10. IPR001790. Ribosomal_L10/acidic_P0. IPR002363. Ribosomal_L10_eubac_CS. [Graphical view]
KO	K02864.
PANTHER	PTHR11560:SF8. PTHR11560:SF8. 1 hit.
Pfam	PF00466. Ribosomal_L10. 1 hit. [Graphical view]
PROSITE	PS01109. RIBOSOMAL_L10. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5CP99_CLAM3

Accession

Primary (citable) accession number: A5CP99

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)