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Protein

Phosphoenolpyruvate carboxylase

Gene

ppcA

Organism
Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei161 – 1611UniRule annotation
Active sitei567 – 5671UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciCMIC443906:GCI2-398-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotationSAAS annotation (EC:4.1.1.31UniRule annotationSAAS annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcAImported
Synonyms:ppcUniRule annotation
Ordered Locus Names:CMM_0383Imported
OrganismiClavibacter michiganensis subsp. michiganensis (strain NCPPB 382)Imported
Taxonomic identifieri443906 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesMicrobacteriaceaeClavibacter
ProteomesiUP000001564 Componenti: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi443906.CMM_0383.

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238647.
KOiK01595.
OMAiFTSNWEL.
OrthoDBiEOG6TJ7T8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 2 hits.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5CMW9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTPPKKPLP LEHDSTRDGT RDAVEPALRS DVSHLGGLLG QVLRESGGDD
60 70 80 90 100
LLRDVERLRE LVIDAYESAR DASIDDAERL VATFTPERAE QVARAFTCYF
110 120 130 140 150
HLANLAEEHH RVRVLREREA AAGFVPDSIP DAVGKLTEEL GREEAMRRLG
160 170 180 190 200
EMRFHPVLTA HPTEARRRAV ATGIRRIGDL LTERDGAMAG TLTGADVDRR
210 220 230 240 250
LLEEIDGLWR TTPLRTTRPT PLDEVRTAMG VFDQTLFEVV PRVYRLLDDW
260 270 280 290 300
LLGDEAGVRD AVAPAFFRLG NWIAADRDGN PYVTAAVTEE AAGIASEHIL
310 320 330 340 350
LGLERVALRV GRSLTLGDAD TPPSAELREL AAAQDALAPH LTARIGTRAP
360 370 380 390 400
AELHRRVLLV IAGRLSATRE RHDDPIAYPS AAELLADLRV LQASLRSAGA
410 420 430 440 450
HRIAGGELQG LVWQAETFGF HLAEMEVRQH SQVHREALRE VLAVAAADAS
460 470 480 490 500
GDQAPELAPM TVEVLDVFRT LARLQERHGV APFSRFIVSF TQSADDIRTV
510 520 530 540 550
HELAALALGS AEAAPVLDVI PLFETFADLN ASTEILDGMI RLPQVAARLA
560 570 580 590 600
QTGRKLEVML GYSDSSKDVG PVSATFALFD AQARIAAWAR ENDIELTLFH
610 620 630 640 650
GRGGALGRGG GPADRAVRAQ PPGSVDGRFK LTEQGEVIFA HYGDKRIAAR
660 670 680 690 700
HIEQMAAATL LASAPSNEER NAVAAEGSAE MVRTMDEASR ARFFELVKAP
710 720 730 740 750
GFAPWFAQVT PMEEIGLLAL GSRPARRGLS VESLEDLRAI PWVFAWTQAR
760 770 780 790 800
INLTGWFGLG SALAAVGDEA VLRKAYEEWP LFTSMIDNVE MSLAKTDGRL
810 820 830 840 850
AERYLALGDR PDLAALVTEE MERTREWVRK ATGRGEILEG RPVLRRAVRL
860 870 880 890 900
RSPYVDALSL LQLRALRALR TSASEAAGQG APGQADPTDP DHRLLLLTVN
910
GIAAGLQNTG
Length:910
Mass (Da):99,101
Last modified:June 12, 2007 - v1
Checksum:iD703A9F339E34BAB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM711867 Genomic DNA. Translation: CAN00405.1.
RefSeqiWP_011931603.1. NC_009480.1.

Genome annotation databases

EnsemblBacteriaiCAN00405; CAN00405; CMM_0383.
KEGGicmi:CMM_0383.
PATRICi21451443. VBIClaMic82482_0459.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM711867 Genomic DNA. Translation: CAN00405.1.
RefSeqiWP_011931603.1. NC_009480.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi443906.CMM_0383.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAN00405; CAN00405; CMM_0383.
KEGGicmi:CMM_0383.
PATRICi21451443. VBIClaMic82482_0459.

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238647.
KOiK01595.
OMAiFTSNWEL.
OrthoDBiEOG6TJ7T8.

Enzyme and pathway databases

BioCyciCMIC443906:GCI2-398-MONOMER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 2 hits.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity."
    Gartemann K.H., Abt B., Bekel T., Burger A., Engemann J., Flugel M., Gaigalat L., Goesmann A., Grafen I., Kalinowski J., Kaup O., Kirchner O., Krause L., Linke B., McHardy A., Meyer F., Pohle S., Ruckert C.
    , Schneiker S., Zellermann E.M., Puhler A., Eichenlaub R., Kaiser O., Bartels D.
    J. Bacteriol. 190:2138-2149(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NCPPB 382Imported.

Entry informationi

Entry nameiA5CMW9_CLAM3
AccessioniPrimary (citable) accession number: A5CMW9
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: July 22, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.