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A5CMQ3 (A5CMQ3_CLAM3) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
AgaA protein EMBL CAN00339.1
EC=3.2.1.22 EMBL CAN00339.1
Gene names
Name:agaA EMBL CAN00339.1
Ordered Locus Names:CMM_0317
OrganismClavibacter michiganensis subsp. michiganensis (strain NCPPB 382) [Complete proteome] [HAMAP] EMBL CAN00339.1
Taxonomic identifier443906 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length727 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL CAN00339.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionraffinose alpha-galactosidase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A5CMQ3 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 9AACFCED319802A1

FASTA72778,571
        10         20         30         40         50         60 
MPDTAVPSAL LHLRASGVSL VLDLTEGRLP AVVHWGADLG DTTAADLATL ALAAVEPIAG 

        70         80         90        100        110        120 
SVADDPIRLA ILPEAHTSWT GKPGLEGHRD GADWSPLFRV ASATVDGDPL PAGADGRPGS 

       130        140        150        160        170        180 
ASTGPALVHV DAVDEVAGLG LALDVELLAS GLVRTRAEVT NTGEGTYSVG GVTLALPLPA 

       190        200        210        220        230        240 
EAREILDFAG RWGLERTPQR RELVVGIHER EGRKGRTGPD AATLLSVGTP GFGFRQGEVR 

       250        260        270        280        290        300 
GVHVAFSGNH RHYAERLSTG RQVIGGGELL LPGEVRLARG ESYASPWVYA AYGDGLDDQA 

       310        320        330        340        350        360 
SRFHRHLRAR DTHPRRDRPM TINVWEAVYF DHDLARLTDL ADRAAALGVE RYVLDDGWFR 

       370        380        390        400        410        420 
HRRDDHAGLG DWYVDEGVWP DGLGPIIDHV TGLGMEFGIW FEPEMVNEDS DLARAHPEWI 

       430        440        450        460        470        480 
MATGGRLPVR ARDQQVLDLA IPEAYAHVLE RMTAILSEND IAYIKWDHNR DLVDAGISPR 

       490        500        510        520        530        540 
GEAGVHLQTI AAYRLMDELK ARFPGLEIES CSSGGSRVDL GVLERTDLVW VSDCIDPLDR 

       550        560        570        580        590        600 
QTMMRWTMQL LPPELMGSHI ASGVSHTTGR AHRLAFRAGS ALYGHLGIEW DLAQATDEEN 

       610        620        630        640        650        660 
ADLAAWIALY KEERALMHTG TVVRADESDP TLLVYGAVAS DAASALFFLA SIGRSEVSPR 

       670        680        690        700        710        720 
GRFLLPGLDP ARRYRVEPVR IGTPEPGFAA PAWWDGVELT GRALAASGLH APLMLPESIA 


ILRVTAV

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References

[1]"The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity."
Gartemann K.-H., Abt B., Bekel T., Burger A., Engemann J., Fluegel M., Gaigalat L., Goesmann A., Graefen I., Kalinowski J., Kaup O., Kirchner O., Krause L., Linke B., McHardy A., Meyer F., Pohle S., Rueckert C. expand/collapse author list , Schneiker S., Zellermann E.-M., Puehler A., Eichenlaub R., Kaiser O., Bartels D.
J. Bacteriol. 190:2138-2149(2008) [PubMed: 18192381] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM711867 Genomic DNA. Translation: CAN00339.1.
RefSeqYP_001221057.1. NC_009480.1.

3D structure databases

ProteinModelPortalA5CMQ3.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5CMQ3.

Protein family/group databases

CAZyGH36. Glycoside Hydrolase Family 36.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5175612.
GenomeReviewsGene locus CMM_0317 in contig AM711867_GR.
KEGGcmi:CMM_0317.
PATRIC21451305. VBIClaMic82482_0390.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3345.
HOGENOMHBG299823.
OMATPWLYAS.
ProtClustDBCLSK960242.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR002252. Glyco_hydro_36.
IPR000111. Glyco_hydro_GHD.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK07407.
PfamPF02065. Melibiase. 1 hit.
[Graphical view]
PIRSFPIRSF005536. Agal. 1 hit.
PRINTSPR00743. GLHYDRLASE36.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS00512. ALPHA_GALACTOSIDASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5CMQ3_CLAM3
AccessionPrimary (citable) accession number: A5CMQ3
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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