A5CLY6 (A5CLY6_CLAM3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
PelA2 protein EMBL CAN00065.1

Gene names

Name:	pelA2 EMBL CAN00065.1
Ordered Locus Names:	CMM_0051

Organism

Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) [Complete proteome] [HAMAP] EMBL CAN00065.1

Taxonomic identifier

443906 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length	283 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	pectate lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5CLY6 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 3F573B37ACBDBB0D	FASTA	283	29,388
	10 20 30 40 50 60 MPPLLPARRH HLATRPWAVA LVVLIAIGGV AAVPASSAHA AGLPAQGSTI STLPAFPAPT 70 80 90 100 110 120 SVKPPRATPY EVPAGQTVDY NNAELNGSTS GRGEFQQPVI LVHPGGTVKN VIIGPLAADG 130 140 150 160 170 180 IHCEASCTIE NMYSSHVGED AVTLLDGSPT PSVVTIQGGG VQHAYDKVVQ MDGAGTVRIM 190 200 210 220 230 240 HFAASDIGSL VRSCGNCPHQ YPRHIVVSDV FIDGGRYKVA GVNQNFGDTA KLDHITIRGT 250 260 270 280 RMQVCDRTIG GRGTPAKEVP GGSGDPYAGV CDFSYATILF EHG

References

[1]

"The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity." Gartemann K.-H., Abt B., Bekel T., Burger A., Engemann J., Fluegel M., Gaigalat L., Goesmann A., Graefen I., Kalinowski J., Kaup O., Kirchner O., Krause L., Linke B., McHardy A., Meyer F., Pohle S., Rueckert C. , Schneiker S., Zellermann E.-M., Puehler A., Eichenlaub R., Kaiser O., Bartels D. J. Bacteriol. 190:2138-2149(2008) [PubMed: 18192381] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM711867 Genomic DNA. Translation: CAN00065.1.
RefSeq	YP_001220790.1. NC_009480.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A5CLY6.
Protein family/group databases
CAZy	PL3. Polysaccharide Lyase Family 3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5173784.
GenomeReviews	Gene locus CMM_0051 in contig AM711867_GR.
KEGG	cmi:CMM_0051.
PATRIC	21450759. VBIClaMic82482_0117.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG05501.
HOGENOM	HBG418288.
ProtClustDB	CLSK971419.
Family and domain databases
InterPro	IPR004898. Pectate_lyase_cat. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
Pfam	PF03211. Pectate_lyase. 1 hit. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5CLY6_CLAM3

Accession

Primary (citable) accession number: A5CLY6

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)