A5CLX7 (A5CLX7_CLAM3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
PelA1 protein EMBL CAN00055.1

Gene names

Name:	pelA1 EMBL CAN00055.1
Ordered Locus Names:	CMM_0043

Organism

Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) [Complete proteome] [HAMAP] EMBL CAN00055.1

Taxonomic identifier

443906 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Clavibacter

Protein attributes

Sequence length	283 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	pectate lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5CLX7 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 128532079A33C4CE	FASTA	283	29,426
	10 20 30 40 50 60 MPPVPTTQRH HLVTRPWVVV LVILVAVGGI ATAPASSAHA AGLPAQGSSI STLPAFPAPT 70 80 90 100 110 120 SVKPPRATPY EVPAGQTVDY GNAELNGSTS GRGEFQQPVI LVHPGGTVKN VIIGSLAADG 130 140 150 160 170 180 IHCEASCTIE NMWSSHVGED AVTLLDGSPT SSVVTIQGGG VQHAYDKVVQ MDGAGTVRIM 190 200 210 220 230 240 HFAASDIGSL VRSCGNCPHQ YPRHMVVSDV FIDGGRYKVA GVNQNFGDTA KLDHITIRGT 250 260 270 280 RMQVCDRTIG GRGTPAKEVP GGSGDPYPGV CDFSYATILF EHG

References

[1]

"The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity." Gartemann K.-H., Abt B., Bekel T., Burger A., Engemann J., Fluegel M., Gaigalat L., Goesmann A., Graefen I., Kalinowski J., Kaup O., Kirchner O., Krause L., Linke B., McHardy A., Meyer F., Pohle S., Rueckert C. , Schneiker S., Zellermann E.-M., Puehler A., Eichenlaub R., Kaiser O., Bartels D. J. Bacteriol. 190:2138-2149(2008) [PubMed: 18192381] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM711867 Genomic DNA. Translation: CAN00055.1.
RefSeq	YP_001220782.1. NC_009480.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A5CLX7.
Protein family/group databases
CAZy	PL3. Polysaccharide Lyase Family 3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5174722.
GenomeReviews	Gene locus CMM_0043 in contig AM711867_GR.
KEGG	cmi:CMM_0043.
PATRIC	21450747. VBIClaMic82482_0111.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG05501.
HOGENOM	HBG418288.
OMA	SATITNV.
ProtClustDB	CLSK971419.
Family and domain databases
InterPro	IPR004898. Pectate_lyase_cat. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
Pfam	PF03211. Pectate_lyase. 1 hit. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5CLX7_CLAM3

Accession

Primary (citable) accession number: A5CLX7

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)