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Protein
Submitted name:

Ribosomal large subunit pseudouridine synthase

Gene

rluC

Organism
Orientia tsutsugamushi (strain Boryong) (Rickettsia tsutsugamushi)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionIsomeraseSAAS annotation, LyaseImported, RNA-bindingPROSITE-ProRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciOTSU357244:G1GJM-2162-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Ribosomal large subunit pseudouridine synthaseImported (EC:4.2.1.70Imported)
Gene namesi
Name:rluCImported
Ordered Locus Names:OTBS_2144Imported
OrganismiOrientia tsutsugamushi (strain Boryong) (Rickettsia tsutsugamushi)Imported
Taxonomic identifieri357244 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeOrientia
Proteomesi
  • UP000001565 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi357244.OTBS_2144

Structurei

3D structure databases

ProteinModelPortaliA5CFM2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini12 – 79S4 RNA-bindingInterPro annotationAdd BLAST68

Sequence similaritiesi

Belongs to the pseudouridine synthase RluA family.SAAS annotation

Phylogenomic databases

eggNOGiENOG4105EI2 Bacteria
COG0564 LUCA
HOGENOMiHOG000275914
KOiK06179
OMAiPKTHVYR
OrthoDBiPOG091H064O

Family and domain databases

CDDicd02869 PseudoU_synth_RluCD_like, 1 hit
cd00165 S4, 1 hit
Gene3Di3.10.290.10, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR006224 PsdUridine_synth_RluC/D_CS
IPR006145 PsdUridine_synth_RsuA/RluD
IPR002942 S4_RNA-bd
IPR036986 S4_RNA-bd_sf
PfamiView protein in Pfam
PF00849 PseudoU_synth_2, 1 hit
PF01479 S4, 1 hit
SMARTiView protein in SMART
SM00363 S4, 1 hit
SUPFAMiSSF55120 SSF55120, 1 hit
PROSITEiView protein in PROSITE
PS01129 PSI_RLU, 1 hit
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

A5CFM2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKITISNCLV TTRLDKFLKR KYSHLTQGVI ERGIRKGHIK VNDAKSKAKL
60 70 80 90 100
QVKDNDILTI ADYLTSCSNQ KHIKLKKKVK DNVGVKALAH KIVNNYKIAE
110 120 130 140 150
TSDYIIINKP ALLPTQGGSK ISLSLDDAIK YLNKSFYYDF KLVHRLDRET
160 170 180 190 200
TGLLIIAKNH GTAIKLSQAF LHHSIEKEYI AILQGVPSQL SGEIITNITK
210 220 230 240 250
TGDRMIETQN GGKVSITKYQ VKAISINSQL SLVSFIPVTG RTHQLRVHAA
260 270 280 290 300
KIGYPIIGDK KYNISNTYYN YSLKLHAAKI CIPKHLFGNQ RIYYAPLPYQ
310
FQQVISTFFD HN
Length:312
Mass (Da):35,285
Last modified:June 12, 2007 - v1
Checksum:iBE2DC437956860ED
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM494475 Genomic DNA Translation: CAM81239.1
RefSeqiWP_011945164.1, NC_009488.1

Genome annotation databases

EnsemblBacteriaiCAM81239; CAM81239; OTBS_2144
GeneIDi29642857
KEGGiots:OTBS_2144

Entry informationi

Entry nameiA5CFM2_ORITB
AccessioniPrimary (citable) accession number: A5CFM2
Entry historyiIntegrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: May 23, 2018
This is version 71 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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