A5CFB3 (A5CFB3_ORITB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Type IV secretion system protein EMBL CAM81048.1

Gene names

Name:	virB6-3 EMBL CAM81048.1
Ordered Locus Names:	OTBS_1953

Organism

Orientia tsutsugamushi (strain Boryong) (Rickettsia tsutsugamushi) [Complete proteome] [HAMAP]

Taxonomic identifier

357244 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Orientia

Protein attributes

Sequence length	1091 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	protein secretion by the type IV secretion system Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5CFB3 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: E098A727D3780400	FASTA	1,091	122,495
	10 20 30 40 50 60 MQSKIIKFAI IAVCIAVVSF ILMLFGALRS GDDCWYRYNA DGQDLDVIRL TQNVRASGQY 70 80 90 100 110 120 DSLRLGGIVD PSKPCGLWIK SDFYVSVHEE NGQLKPVNID FLIDGTVSLC QAYLPKNALT 130 140 150 160 170 180 CKLKYNDGKE CNISDINKFF NGEKSDCIED CEDNTDDSGN LIPIPRILDP GDGLPVILKA 190 200 210 220 230 240 NVGEWRNLAQ VSAGDEIEVK IGRNQNFSHG GVENTEIGYA YSRPEFDWFN DTSLDWQKGT 250 260 270 280 290 300 NDTFGIIKRT KQVRADCQEG KKNYSPLCGR YSPWGEGDNY IKQCDECKGC TCEDCGMKPK 310 320 330 340 350 360 CPGSKPVCPA PECEMAGSHG WFSKHFAVFN SELGKDKCFY TGTVKDIFGG KDCPEKYLLD 370 380 390 400 410 420 CKRAVLADGL PEEYRDDGTR TVPATLTEQD RNDIKSLGRI ACSNRLDEQL VKNRQKVYSW 430 440 450 460 470 480 RSATYATDLK YRFSSVQDKD SILGNKCKSD FPSGKDLATG CYGITKVNQD LIIYKDQISE 490 500 510 520 530 540 TLFSGPRYLQ YMIRPDINIE SMKNSVGGYV LYLKQNSCVR KSGVAFDDSK FHGRGKILYA 550 560 570 580 590 600 IVPAGVDVNK LKSHELDVYT TGSLDVKVED LVGKAKISSS QSGYIWFKIL NDEKDYKASV 610 620 630 640 650 660 GEYKITMSTI VPRGKFISKV LNPIIRIFEN KIANASKTMF KNITCYQQND KSRCTNFFNY 670 680 690 700 710 720 IRAMLTLYIM GCGFAFMLGA VNFTAKELVI RIVKVIIVSG LINEGTFNFF NAYLYDLIMN 730 740 750 760 770 780 FSKQLMVNVS GYEYDQNIGT FLFLDELMSK IFFNKTFYVQ LLSLLSMGLM GVVYYIIIFV 790 800 810 820 830 840 PIILIIISLL KTIMVYLVST TAVALLVGLA PLFLSFMLFN RTWYLFDNWV RMLFRYLIEP 850 860 870 880 890 900 VILMAGITIL TQLFIVYLDF VLGYSVCWKC AIVFKLPKID ALGGVLGSYG GQELFCINWF 910 920 930 940 950 960 GPWGYDNRAD NNIGLAMNYI IALVIIAYCM YSYIDFSSLM VDILTAGGAG GIAPSVGHVA 970 980 990 1000 1010 1020 PQVWDTAVQW TEKAVMKVAS IGKKGSFAVR KGIGKGISHA KSKYSSSQTE KSKDKDNVVN 1030 1040 1050 1060 1070 1080 RRTNLENKSL NDKRGSAIRG KNSNVENVKP NQNTYLRVNN QEIDLNSPKP SHNESSVRRH 1090 DLNKKNFENN D

References

[1]

"The Orientia tsutsugamushi genome reveals massive proliferation of conjugative type IV secretion system and host-cell interaction genes." Cho N.-H., Kim H.-R., Lee J.-H., Kim S.-Y., Kim J., Cha S., Kim S.-Y., Darby A.C., Fuxelius H.-H., Yin J., Kim J.H., Kim J., Lee S.J., Koh Y.-S., Jang W.-J., Park K.-H., Andersson S.G.E., Choi M.-S., Kim I.-S. Proc. Natl. Acad. Sci. U.S.A. 104:7981-7986(2007) [PubMed: 17483455] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM494475 Genomic DNA. Translation: CAM81048.1.
RefSeq	YP_001249143.1. NC_009488.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A5CFB3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5218993.
GenomeReviews	Gene locus OTBS_1953 in contig AM494475_GR.
KEGG	ots:OTBS_1953.
PATRIC	22825417. VBIOriTsu83812_2115.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3704.
HOGENOM	HBG586502.
OMA	YLDFVLG.
ProtClustDB	CLSK870746.
Enzyme and pathway databases
BioCyc	OTSU357244:OTBS_1953-MONOMER.
Family and domain databases
InterPro	IPR007688. Conjugal_tfr_TrbL/VirB6. [Graphical view]
KO	K03201.
Pfam	PF04610. TrbL. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5CFB3_ORITB

Accession

Primary (citable) accession number: A5CFB3

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)