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A5BTM9

- A5BTM9_VITVI

UniProt

A5BTM9 - A5BTM9_VITVI

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Protein
Submitted name:

RuBisCo large subunit

Gene
rbcL, VITISV_042148
Organism
Vitis vinifera (Grape)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: InterPro

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
RuBisCo large subunitImported
Gene namesi
Name:rbcLImported
ORF Names:VITISV_042148Imported
Encoded oniMitochondrionImported
OrganismiVitis vinifera (Grape)Imported
Taxonomic identifieri29760 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis

Subcellular locationi

GO - Cellular componenti

  1. mitochondrion Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

MitochondrionImported

PTM / Processingi

Proteomic databases

PRIDEiA5BTM9.

Structurei

3D structure databases

ProteinModelPortaliA5BTM9.
SMRiA5BTM9. Positions 18-473.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1850.
KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5BTM9-1 [UniParc]FASTAAdd to Basket

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MSPQTETKAS VGFIAGVKDY KLTYYTPEYE TKPTDILAAF RVTPQPGVPP    50
EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYHIEPV AGEENQYIAY 100
VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL RALRLEDLRI PPAYSKTFQG 150
PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRAVY ECLRGGLDFT 200
KDDENVNSQP FMRWRDRFLF CAEAIFKSQA ETGEIKGHYL NATAGTCEEM 250
IKRAVFAREL GVPIIMHDYL TGGFTANTSL AHYCRDNGLL LHIHRAMHAV 300
IDRQKNHGMH FRVLAKALRL SGGDHIHAGT VVGKLEGERE ITLGFVDLLR 350
DDFVEKDRSR GIYFTQDWVS LPGVLPVASG GIHVWHMPAL TEIFGDDSVL 400
QFGGGTLGHP WGNAPGAVAN RVALEACVQA RNEGRDLARE GNEIIRAASK 450
WSPELAAACE VWKEIQFEFP AMDTL 475
Length:475
Mass (Da):52,561
Last modified:June 12, 2007 - v1
Checksum:i714780449B5DDF29
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM470652 Genomic DNA. Translation: CAN65991.1.
FM179380 Genomic DNA. Translation: CAQ77564.1.
RefSeqiYP_002608342.1. NC_012119.1.

Genome annotation databases

GeneIDi7498516.
KEGGivvi:7498516.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM470652 Genomic DNA. Translation: CAN65991.1 .
FM179380 Genomic DNA. Translation: CAQ77564.1 .
RefSeqi YP_002608342.1. NC_012119.1.

3D structure databases

ProteinModelPortali A5BTM9.
SMRi A5BTM9. Positions 18-473.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi A5BTM9.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 7498516.
KEGGi vvi:7498516.

Phylogenomic databases

eggNOGi COG1850.
KOi K01601.

Family and domain databases

Gene3Di 3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPi MF_01338. RuBisCO_L_type1.
InterProi IPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view ]
Pfami PF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view ]
SUPFAMi SSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEi PS00157. RUBISCO_LARGE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome."
    Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D., Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D., Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.
    , Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N., Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A., Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T., Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A., Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J., Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P., Gutin A., Van de Peer Y., Salamini F., Viola R.
    PLoS ONE 2:e1326-e1326(2007)
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "mtDNA of Vitis vinifera and the issue of rampant horizontal gene transfer."
    Goremykin V., Salamini F., Velasco R., Viola R.
    Mol. Biol. Evol. 0:0-0(2008)
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiA5BTM9_VITVI
AccessioniPrimary (citable) accession number: A5BTM9
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: February 19, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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