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A5BTM9

- A5BTM9_VITVI

UniProt

A5BTM9 - A5BTM9_VITVI

Protein
Submitted name:

RuBisCo large subunit

Gene

rbcL

Organism
Vitis vinifera (Grape)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 43 (01 Oct 2014)
      Sequence version 1 (12 Jun 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. ribulose-bisphosphate carboxylase activity Source: InterPro

    GO - Biological processi

    1. carbon fixation Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    RuBisCo large subunitImported
    Gene namesi
    Name:rbcLImported
    ORF Names:VITISV_042148Imported
    Encoded oniMitochondrionImported
    OrganismiVitis vinifera (Grape)Imported
    Taxonomic identifieri29760 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis

    Subcellular locationi

    GO - Cellular componenti

    1. mitochondrion Source: UniProtKB-KW

    Keywords - Cellular componenti

    MitochondrionImported

    PTM / Processingi

    Proteomic databases

    PRIDEiA5BTM9.

    Structurei

    3D structure databases

    ProteinModelPortaliA5BTM9.
    SMRiA5BTM9. Positions 18-473.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1850.
    KOiK01601.

    Family and domain databases

    Gene3Di3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    HAMAPiMF_01338. RuBisCO_L_type1.
    InterProiIPR020878. RuBisCo_large_chain_AS.
    IPR020888. RuBisCO_lsu.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    IPR017444. RuBisCO_lsu_N.
    [Graphical view]
    PfamiPF00016. RuBisCO_large. 1 hit.
    PF02788. RuBisCO_large_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A5BTM9-1 [UniParc]FASTAAdd to Basket

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    MSPQTETKAS VGFIAGVKDY KLTYYTPEYE TKPTDILAAF RVTPQPGVPP    50
    EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYHIEPV AGEENQYIAY 100
    VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL RALRLEDLRI PPAYSKTFQG 150
    PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRAVY ECLRGGLDFT 200
    KDDENVNSQP FMRWRDRFLF CAEAIFKSQA ETGEIKGHYL NATAGTCEEM 250
    IKRAVFAREL GVPIIMHDYL TGGFTANTSL AHYCRDNGLL LHIHRAMHAV 300
    IDRQKNHGMH FRVLAKALRL SGGDHIHAGT VVGKLEGERE ITLGFVDLLR 350
    DDFVEKDRSR GIYFTQDWVS LPGVLPVASG GIHVWHMPAL TEIFGDDSVL 400
    QFGGGTLGHP WGNAPGAVAN RVALEACVQA RNEGRDLARE GNEIIRAASK 450
    WSPELAAACE VWKEIQFEFP AMDTL 475
    Length:475
    Mass (Da):52,561
    Last modified:June 12, 2007 - v1
    Checksum:i714780449B5DDF29
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM470652 Genomic DNA. Translation: CAN65991.1.
    FM179380 Genomic DNA. Translation: CAQ77564.1.
    RefSeqiYP_002608342.1. NC_012119.1.

    Genome annotation databases

    GeneIDi7498516.
    KEGGivvi:7498516.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM470652 Genomic DNA. Translation: CAN65991.1 .
    FM179380 Genomic DNA. Translation: CAQ77564.1 .
    RefSeqi YP_002608342.1. NC_012119.1.

    3D structure databases

    ProteinModelPortali A5BTM9.
    SMRi A5BTM9. Positions 18-473.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi A5BTM9.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 7498516.
    KEGGi vvi:7498516.

    Phylogenomic databases

    eggNOGi COG1850.
    KOi K01601.

    Family and domain databases

    Gene3Di 3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    HAMAPi MF_01338. RuBisCO_L_type1.
    InterProi IPR020878. RuBisCo_large_chain_AS.
    IPR020888. RuBisCO_lsu.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    IPR017444. RuBisCO_lsu_N.
    [Graphical view ]
    Pfami PF00016. RuBisCO_large. 1 hit.
    PF02788. RuBisCO_large_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEi PS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome."
      Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D., Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D., Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.
      , Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N., Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A., Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T., Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A., Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J., Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P., Gutin A., Van de Peer Y., Salamini F., Viola R.
      PLoS ONE 2:e1326-e1326(2007)
      Cited for: NUCLEOTIDE SEQUENCE.
    2. "mtDNA of Vitis vinifera and the issue of rampant horizontal gene transfer."
      Goremykin V., Salamini F., Velasco R., Viola R.
      Mol. Biol. Evol. 0:0-0(2008)
      Cited for: NUCLEOTIDE SEQUENCE.

    Entry informationi

    Entry nameiA5BTM9_VITVI
    AccessioniPrimary (citable) accession number: A5BTM9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 12, 2007
    Last sequence update: June 12, 2007
    Last modified: October 1, 2014
    This is version 43 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)