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Protein
Submitted name:

Putative uncharacterized protein

Gene

VITISV_018727

Organism
Vitis vinifera (Grape)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. carbon-sulfur lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:VITISV_018727Imported
OrganismiVitis vinifera (Grape)Imported
Taxonomic identifieri29760 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis

PTM / Processingi

Proteomic databases

PRIDEiA5BRD1.

Structurei

3D structure databases

ProteinModelPortaliA5BRD1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG290378.

Family and domain databases

Gene3Di2.10.25.30. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR006948. Alliinase_C.
IPR025314. DUF4219.
IPR006947. EGF_alliinase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR013103. RVT_2.
[Graphical view]
PfamiPF04864. Alliinase_C. 1 hit.
PF13961. DUF4219. 1 hit.
PF07727. RVT_2. 2 hits.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

A5BRD1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MTSXVSLNAL APPVFDGINY QVWXVRIEAY LDASDLWEVV SEXYEVPPLS
60 70 80 90 100
DNPTMAQIKL HNERRQRKSK AKASLFAAVS SIIFTRIMTL KTTNEIWNFL
110 120 130 140 150
KKEYEGNEQV KGMQVLNLIR EFEMQRMKEL ETIKDYSDRL LSIVNKVRLL
160 170 180 190 200
DIDFSDSRIV QKISITIPEK FETTISSLEN SKDVSSITLA KLLNALQTQE
210 220 230 240 250
QRRLMRQEGS VEGAFQAISQ YKKEMQSNNN SNNNTQKFPS CPYCKKIQSF
260 270 280 290 300
TKKVLVEAGC KMSQVCGCTN HMTYDQGLFK ELDKTVTSKA RIRNGAYLAI
310 320 330 340 350
KGKGIVAIEG HTGYKVLFED NHCMIADAQG XEVFIVQMKG KSFALDLMQK
360 370 380 390 400
EQVAIHKEES NTMLWHRRLR QFHHIALLFX KKNDLGEGLP ELEDLEFQEE
410 420 430 440 450
NNNIDDEPVK ETXSLSNIYQ RCDVVIIEPT GYEEAATDKK WMDAINEEFK
460 470 480 490 500
MIEKHXTWEL VDKPTHKRAI GVKWVYRTKL NYDGSINKHK ARLVVKGYAQ
510 520 530 540 550
XFGGWNIHQM DVKSAFLNGY LEEEIFVEQL EGFIVKGMEE KVYLLKNALY
560 570 580 590 600
GLKQAPRXWY NKIDSHLLGL GFTKSLSEFT LYFRKACDET LVKYAKEILK
610 620 630 640 650
KFKMEEYNPS ATPMNQNEKF CKEDGAAKAD ERLYKTIIGC LMYLTTTRPD
660 670 680 690 700
IMNVVSLLSS GDPLFLEPFW IQNAASSAML VAGWHRMSYT FTNQSLISRL
710 720 730 740 750
LEDHIRKLHT TVGNAVTQGR FIVFGAGSTQ LLNAAVHALS PDNSSAPAKV
760 770 780 790 800
VASFPFYTVY QLQTDFFRSV NFQFQGDASL WKNKSDSTLN FIEFVTSPNN
810 820 830 840 850
PDGQLKKAVL QGPHVKTIHD HAYYWPHFTA IPAPADEDLM IFTLSKLTGH
860 870 880 890 900
AGTRLGWALI KDEALYQRMS TYVKMNILGV SKDTQLRALK LVKVALEGSG
910 920 930 940 950
KEIFEFGYTA MKERWERLSN ALSESKRFSI QEIAPQYCTF FKTVRGPSPG

DSHS
Length:954
Mass (Da):108,922
Last modified:June 12, 2007 - v1
Checksum:i55B638C4E5E729E6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM468287 Genomic DNA. Translation: CAN81398.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM468287 Genomic DNA. Translation: CAN81398.1.

3D structure databases

ProteinModelPortaliA5BRD1.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiA5BRD1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiNOG290378.

Family and domain databases

Gene3Di2.10.25.30. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR006948. Alliinase_C.
IPR025314. DUF4219.
IPR006947. EGF_alliinase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR013103. RVT_2.
[Graphical view]
PfamiPF04864. Alliinase_C. 1 hit.
PF13961. DUF4219. 1 hit.
PF07727. RVT_2. 2 hits.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome."
    Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D., Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D., Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.
    , Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N., Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A., Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T., Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A., Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J., Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P., Gutin A., Van de Peer Y., Salamini F., Viola R.
    PLoS ONE 2:e1326-e1326(2007)
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiA5BRD1_VITVI
AccessioniPrimary (citable) accession number: A5BRD1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: October 1, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.