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A5BRD1

- A5BRD1_VITVI

UniProt

A5BRD1 - A5BRD1_VITVI

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Protein
Submitted name: Putative uncharacterized protein
Gene
VITISV_018727
Organism
Vitis vinifera (Grape)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. carbon-sulfur lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:VITISV_018727Imported
OrganismiVitis vinifera (Grape)Imported
Taxonomic identifieri29760 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis

PTM / Processingi

Proteomic databases

PRIDEiA5BRD1.

Structurei

3D structure databases

ProteinModelPortaliA5BRD1.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG290378.

Family and domain databases

Gene3Di2.10.25.30. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR006948. Alliinase_C.
IPR025314. DUF4219.
IPR006947. EGF_alliinase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR013103. RVT_2.
[Graphical view]
PfamiPF04864. Alliinase_C. 1 hit.
PF13961. DUF4219. 1 hit.
PF07727. RVT_2. 2 hits.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

A5BRD1-1 [UniParc]FASTAAdd to Basket

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MTSXVSLNAL APPVFDGINY QVWXVRIEAY LDASDLWEVV SEXYEVPPLS    50
DNPTMAQIKL HNERRQRKSK AKASLFAAVS SIIFTRIMTL KTTNEIWNFL 100
KKEYEGNEQV KGMQVLNLIR EFEMQRMKEL ETIKDYSDRL LSIVNKVRLL 150
DIDFSDSRIV QKISITIPEK FETTISSLEN SKDVSSITLA KLLNALQTQE 200
QRRLMRQEGS VEGAFQAISQ YKKEMQSNNN SNNNTQKFPS CPYCKKIQSF 250
TKKVLVEAGC KMSQVCGCTN HMTYDQGLFK ELDKTVTSKA RIRNGAYLAI 300
KGKGIVAIEG HTGYKVLFED NHCMIADAQG XEVFIVQMKG KSFALDLMQK 350
EQVAIHKEES NTMLWHRRLR QFHHIALLFX KKNDLGEGLP ELEDLEFQEE 400
NNNIDDEPVK ETXSLSNIYQ RCDVVIIEPT GYEEAATDKK WMDAINEEFK 450
MIEKHXTWEL VDKPTHKRAI GVKWVYRTKL NYDGSINKHK ARLVVKGYAQ 500
XFGGWNIHQM DVKSAFLNGY LEEEIFVEQL EGFIVKGMEE KVYLLKNALY 550
GLKQAPRXWY NKIDSHLLGL GFTKSLSEFT LYFRKACDET LVKYAKEILK 600
KFKMEEYNPS ATPMNQNEKF CKEDGAAKAD ERLYKTIIGC LMYLTTTRPD 650
IMNVVSLLSS GDPLFLEPFW IQNAASSAML VAGWHRMSYT FTNQSLISRL 700
LEDHIRKLHT TVGNAVTQGR FIVFGAGSTQ LLNAAVHALS PDNSSAPAKV 750
VASFPFYTVY QLQTDFFRSV NFQFQGDASL WKNKSDSTLN FIEFVTSPNN 800
PDGQLKKAVL QGPHVKTIHD HAYYWPHFTA IPAPADEDLM IFTLSKLTGH 850
AGTRLGWALI KDEALYQRMS TYVKMNILGV SKDTQLRALK LVKVALEGSG 900
KEIFEFGYTA MKERWERLSN ALSESKRFSI QEIAPQYCTF FKTVRGPSPG 950
DSHS 954
Length:954
Mass (Da):108,922
Last modified:June 12, 2007 - v1
Checksum:i55B638C4E5E729E6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM468287 Genomic DNA. Translation: CAN81398.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM468287 Genomic DNA. Translation: CAN81398.1 .

3D structure databases

ProteinModelPortali A5BRD1.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi A5BRD1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Phylogenomic databases

eggNOGi NOG290378.

Family and domain databases

Gene3Di 2.10.25.30. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR006948. Alliinase_C.
IPR025314. DUF4219.
IPR006947. EGF_alliinase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR013103. RVT_2.
[Graphical view ]
Pfami PF04864. Alliinase_C. 1 hit.
PF13961. DUF4219. 1 hit.
PF07727. RVT_2. 2 hits.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome."
    Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D., Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D., Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.
    , Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N., Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A., Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T., Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A., Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J., Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P., Gutin A., Van de Peer Y., Salamini F., Viola R.
    PLoS ONE 2:e1326-e1326(2007)
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiA5BRD1_VITVI
AccessioniPrimary (citable) accession number: A5BRD1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: April 16, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)