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A5BRD1

- A5BRD1_VITVI

UniProt

A5BRD1 - A5BRD1_VITVI

Protein
Submitted name:

Putative uncharacterized protein

Gene

VITISV_018727

Organism
Vitis vinifera (Grape)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 24 (01 Oct 2014)
      Sequence version 1 (12 Jun 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. carbon-sulfur lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    ORF Names:VITISV_018727Imported
    OrganismiVitis vinifera (Grape)Imported
    Taxonomic identifieri29760 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis

    PTM / Processingi

    Proteomic databases

    PRIDEiA5BRD1.

    Structurei

    3D structure databases

    ProteinModelPortaliA5BRD1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG290378.

    Family and domain databases

    Gene3Di2.10.25.30. 1 hit.
    3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR006948. Alliinase_C.
    IPR025314. DUF4219.
    IPR006947. EGF_alliinase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    IPR013103. RVT_2.
    [Graphical view]
    PfamiPF04864. Alliinase_C. 1 hit.
    PF13961. DUF4219. 1 hit.
    PF07727. RVT_2. 2 hits.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A5BRD1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTSXVSLNAL APPVFDGINY QVWXVRIEAY LDASDLWEVV SEXYEVPPLS    50
    DNPTMAQIKL HNERRQRKSK AKASLFAAVS SIIFTRIMTL KTTNEIWNFL 100
    KKEYEGNEQV KGMQVLNLIR EFEMQRMKEL ETIKDYSDRL LSIVNKVRLL 150
    DIDFSDSRIV QKISITIPEK FETTISSLEN SKDVSSITLA KLLNALQTQE 200
    QRRLMRQEGS VEGAFQAISQ YKKEMQSNNN SNNNTQKFPS CPYCKKIQSF 250
    TKKVLVEAGC KMSQVCGCTN HMTYDQGLFK ELDKTVTSKA RIRNGAYLAI 300
    KGKGIVAIEG HTGYKVLFED NHCMIADAQG XEVFIVQMKG KSFALDLMQK 350
    EQVAIHKEES NTMLWHRRLR QFHHIALLFX KKNDLGEGLP ELEDLEFQEE 400
    NNNIDDEPVK ETXSLSNIYQ RCDVVIIEPT GYEEAATDKK WMDAINEEFK 450
    MIEKHXTWEL VDKPTHKRAI GVKWVYRTKL NYDGSINKHK ARLVVKGYAQ 500
    XFGGWNIHQM DVKSAFLNGY LEEEIFVEQL EGFIVKGMEE KVYLLKNALY 550
    GLKQAPRXWY NKIDSHLLGL GFTKSLSEFT LYFRKACDET LVKYAKEILK 600
    KFKMEEYNPS ATPMNQNEKF CKEDGAAKAD ERLYKTIIGC LMYLTTTRPD 650
    IMNVVSLLSS GDPLFLEPFW IQNAASSAML VAGWHRMSYT FTNQSLISRL 700
    LEDHIRKLHT TVGNAVTQGR FIVFGAGSTQ LLNAAVHALS PDNSSAPAKV 750
    VASFPFYTVY QLQTDFFRSV NFQFQGDASL WKNKSDSTLN FIEFVTSPNN 800
    PDGQLKKAVL QGPHVKTIHD HAYYWPHFTA IPAPADEDLM IFTLSKLTGH 850
    AGTRLGWALI KDEALYQRMS TYVKMNILGV SKDTQLRALK LVKVALEGSG 900
    KEIFEFGYTA MKERWERLSN ALSESKRFSI QEIAPQYCTF FKTVRGPSPG 950
    DSHS 954
    Length:954
    Mass (Da):108,922
    Last modified:June 12, 2007 - v1
    Checksum:i55B638C4E5E729E6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM468287 Genomic DNA. Translation: CAN81398.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM468287 Genomic DNA. Translation: CAN81398.1 .

    3D structure databases

    ProteinModelPortali A5BRD1.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi A5BRD1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Phylogenomic databases

    eggNOGi NOG290378.

    Family and domain databases

    Gene3Di 2.10.25.30. 1 hit.
    3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR006948. Alliinase_C.
    IPR025314. DUF4219.
    IPR006947. EGF_alliinase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    IPR013103. RVT_2.
    [Graphical view ]
    Pfami PF04864. Alliinase_C. 1 hit.
    PF13961. DUF4219. 1 hit.
    PF07727. RVT_2. 2 hits.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome."
      Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D., Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D., Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.
      , Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N., Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A., Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T., Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A., Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J., Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P., Gutin A., Van de Peer Y., Salamini F., Viola R.
      PLoS ONE 2:e1326-e1326(2007)
      Cited for: NUCLEOTIDE SEQUENCE.

    Entry informationi

    Entry nameiA5BRD1_VITVI
    AccessioniPrimary (citable) accession number: A5BRD1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 12, 2007
    Last sequence update: June 12, 2007
    Last modified: October 1, 2014
    This is version 24 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)