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Protein
Submitted name:

Putative uncharacterized protein

Gene

VITISV_013176

Organism
Vitis vinifera (Grape)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. carbon-sulfur lyase activity Source: EnsemblPlants/Gramene
  2. L-tryptophan:2-oxoglutarate aminotransferase activity Source: EnsemblPlants/Gramene
  3. L-tryptophan:pyruvate aminotransferase activity Source: EnsemblPlants/Gramene
  4. pyridoxal phosphate binding Source: EnsemblPlants/Gramene

GO - Biological processi

  1. cotyledon vascular tissue pattern formation Source: EnsemblPlants/Gramene
  2. defense response to bacterium Source: EnsemblPlants/Gramene
  3. gynoecium development Source: EnsemblPlants/Gramene
  4. indoleacetic acid biosynthetic process Source: EnsemblPlants/Gramene
  5. maintenance of root meristem identity Source: EnsemblPlants/Gramene
  6. phloem or xylem histogenesis Source: EnsemblPlants/Gramene
  7. positive gravitropism Source: EnsemblPlants/Gramene
  8. primary root development Source: EnsemblPlants/Gramene
  9. response to ethylene Source: EnsemblPlants/Gramene
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:VITISV_013176Imported
OrganismiVitis vinifera (Grape)Imported
Taxonomic identifieri29760 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: EnsemblPlants/Gramene
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi29760.GSVIVG00016011001.

Structurei

3D structure databases

ProteinModelPortaliA5B9G3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG331832.

Family and domain databases

Gene3Di2.10.25.30. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR006948. Alliinase_C.
IPR006947. EGF_alliinase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF04864. Alliinase_C. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

A5B9G3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKLSGVFSL RHFLVLSLAL NVALISRVVY EGENWREEQI RALMADASEK
60 70 80 90 100
SAHVSMSSPP PPSPSTPSSM AVTSTEIKDD GERVINLDHG DPTMYERFWQ
110 120 130 140 150
QMGDITTIVI SGWQSMSYFS DVKNLCWFLE PEFAKQIIRL HKIVGNAVTD
160 170 180 190 200
NYYIVVGTGS TQLFQAALYA LSPPNASEPM SVVSAAPFYS SYPSVTDFLK
210 220 230 240 250
SGLYKWAGDA NNFNKDGPYI ELVTSPNNPD GSIRQPVVNR SGENLVHDFA
260 270 280 290 300
YYWPQYTPIS SPADHDLMLF TVSKATGHAG MRLGWALVKD EEVAKKMTSF
310 320 330 340 350
IELNTIGVSK DSQQRAAKIL QVISDSYEPV GNPKQSGPFF HFSHSMMEER
360 370 380 390 400
WKALRSAVKQ SGLFSLPEFP SSFCNFLGQA FGSQPAFAWL KCEGGIEDCG
410 420 430 440 450
NFLKXHKILT RNGKHFGASP EYVRVSMLDR DESFNLFTKR LSSLHLSQSK

DHEXESP
Length:457
Mass (Da):50,914
Last modified:June 12, 2007 - v1
Checksum:i607E9E5F46BEE721
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM451277 Genomic DNA. Translation: CAN80923.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM451277 Genomic DNA. Translation: CAN80923.1.

3D structure databases

ProteinModelPortaliA5B9G3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi29760.GSVIVG00016011001.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiNOG331832.

Family and domain databases

Gene3Di2.10.25.30. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR006948. Alliinase_C.
IPR006947. EGF_alliinase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF04864. Alliinase_C. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome."
    Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D., Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D., Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T.
    , Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N., Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A., Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T., Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A., Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J., Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P., Gutin A., Van de Peer Y., Salamini F., Viola R.
    PLoS ONE 2:e1326-e1326(2007)
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiA5B9G3_VITVI
AccessioniPrimary (citable) accession number: A5B9G3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: February 4, 2015
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.