A5B878 (A5B878_VITVI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Nucleoside diphosphate kinase RuleBase RU004013
EC=2.7.4.6 RuleBase RU004013

Gene names

Ordered Locus Names:	VIT_15s0021g01330 EMBL CCB43900.1
ORF Names:	VITISV_036798 EMBL CAN74274.1

Organism

Vitis vinifera (Grape) [Reference proteome] EMBL CAN74274.1

Taxonomic identifier

29760 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › rosids incertae sedis › Vitales › Vitaceae › Vitis

Protein attributes

Sequence length	148 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Catalytic activity	ATP + nucleoside diphosphate = ADP + nucleoside triphosphate. RuleBase RU004013
Sequence similarities	Belongs to the NDK family.

Ontologies

Keywords
Ligand	ATP-binding RuleBase RU004013 Nucleotide-binding
Molecular function	Kinase RuleBase RU004013 Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	CTP biosynthetic process Inferred from electronic annotation. Source: InterPro GTP biosynthetic process Inferred from electronic annotation. Source: InterPro UTP biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW nucleoside diphosphate kinase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5B878 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 57FC64B04BA4FC48	FASTA	148	16,310
	10 20 30 40 50 60 MEQTFIMIKP DGVQRNLVGE IIGRFEKKGF SLKGLKLLSV ERGFAEKHYE DLSSKPFFNG 70 80 90 100 110 120 LVEYIISGPV VAMIWEGKNV VTTGRKIIGA TNPSDSAPGT IRGDFAVDIG RNVIHGSDSV 130 140 GSARKEIALW FPEGPVAWSS SLNHWIYE

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla." The French-Italian Public Consortium for Grapevine Genome Characterization. Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J. , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P. Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Pinot noir / PN40024.
[2]	"The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome." Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D., Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D., Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T. , Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N., Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A., Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T., Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A., Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J., Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P., Gutin A., Van de Peer Y., Salamini F., Viola R. PLoS ONE 2:e1326-e1326(2007) Cited for: NUCLEOTIDE SEQUENCE.
[3]	"High quality assembly and annotation of grapevine genome." Vitulo N., Olivier J., Forcato C., Albiero A., D'Angelo M., Zimbello R., Schiavon R., Rigobello C., Policriti A., Clepet C., Casagrande A., Choisne N., Vezzi A., Hugueney P., Horner D., Mica E., Cattonaro F., Del Fabbro C. , Alaux M., Di Gaspero G., Scalabrin S., Pesole G., Delledonne M., Pezzotti M., Pe E.M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P., Morgante M., Valle G. Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM450092 Genomic DNA. Translation: CAN74274.1. FN594952 Genomic DNA. Translation: CCB43900.1.
RefSeq	XP_002271352.1. XM_002271316.2.
UniGene	Vvi.6748.
3D structure databases
SMR	A5B878. Positions 1-148.
ModBase	Search...
Protein-protein interaction databases
STRING	29760.GSVIVG00019061001.
Proteomic databases
PRIDE	A5B878.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	VIT_15s0021g01330.t01; VIT_15s0021g01330.t01; VIT_15s0021g01330.
GeneID	100258184.
KEGG	vvi:100258184.
Phylogenomic databases
eggNOG	COG0105.
HOGENOM	HOG000224564.
KO	K00940.
ProtClustDB	CLSN2722612.
Gene expression databases
ArrayExpress	A5B878.
Family and domain databases
Gene3D	3.30.70.141. 1 hit.
HAMAP	MF_00451. NDP_kinase.
InterPro	IPR001564. Nucleoside_diP_kinase. IPR023005. Nucleoside_diP_kinase_AS. [Graphical view]
PANTHER	PTHR11349. PTHR11349. 1 hit.
Pfam	PF00334. NDK. 1 hit. [Graphical view]
PRINTS	PR01243. NUCDPKINASE.
SMART	SM00562. NDK. 1 hit. [Graphical view]
SUPFAM	SSF54919. NDK. 1 hit.
PROSITE	PS00469. NDP_KINASES. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5B878_VITVI

Accession

Primary (citable) accession number: A5B878

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	May 1, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)