Skip Header

Contribute Send feedback
Read comments (?) or add your own

A5B0X9 (A5B0X9_VITVI) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Delta-aminolevulinic acid dehydratase RuleBase RU000515
EC=4.2.1.24 RuleBase RU000515
Gene names
Ordered Locus Names:VIT_18s0001g02550 EMBL CBI19005.3
ORF Names:VITISV_011727 EMBL CAN65137.1
OrganismVitis vinifera (Grape) EMBL CAN65137.1
Taxonomic identifier29760 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › Vitales › Vitaceae › Vitis

Protein attributes

Sequence length430 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

2 5-aminolevulinate = porphobilinogen + 2 H2O. RuleBase RU000515

Subunit structure

Homooctamer By similarity. RuleBase RU000515

Sequence similarities

Belongs to the ALADH family. RuleBase RU004161

Sequences

Sequence LengthMass (Da)Tools
A5B0X9 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: DE80B260C89170A3

FASTA43047,334
        10         20         30         40         50         60 
MASMFLNAPC NVGAIKHFDC KNYVGLRASS NQKLDCVGHT IKAPPRRRFI VRASERRDES 

        70         80         90        100        110        120 
MKKMGLTDQE CEAAVVAGNV PEAPPVPPKP AAPAGTPSVP FLPLNRRPRR NRRSPVLRAS 

       130        140        150        160        170        180 
FQETNLSPAN FVYPLFIHEG EEDTPIGAMP GCYRLGWRHG LLEEVAKARD VGVNSVVLFP 

       190        200        210        220        230        240 
KVPDALKSPT GDEAFNDNGL VPRTIRLLKD RYPDLVIYTD VALDPYSSDG HDGIVREDGV 

       250        260        270        280        290        300 
IMNDETVHQL CKQAVAQAKA GADVVSPSDM MDGRVGAIRA ALDAEGFQHV SIMSYTAKYA 

       310        320        330        340        350        360 
SAFYGPFREA LDSNPRFGDK KTYQMNPANY REALTEVRED ESEGADILLV KPGLPYLDVI 

       370        380        390        400        410        420 
RLLRDNSSLP IAAYQVSGEY SMIKAGAVLK MIDEEKVMME SLMCLRRAGA DIILTYFALQ 

       430 
AARCLCGEKR

« Hide

References

« Hide 'large scale' references
[1]"The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
The French-Italian Public Consortium for Grapevine Genome Characterization.
Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J. expand/collapse author list , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
Nature 449:463-467(2007) [PubMed: 17721507] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Pinot noir / PN40024.
[2]"The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome."
Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D., Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D., Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T. expand/collapse author list , Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N., Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A., Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T., Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A., Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J., Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P., Gutin A., Van de Peer Y., Salamini F., Viola R.
PLoS ONE 2:e1326-e1326(2007)
Cited for: NUCLEOTIDE SEQUENCE.
[3]"High quality assembly and annotation of grapevine genome."
Vitulo N., Olivier J., Forcato C., Albiero A., D'Angelo M., Zimbello R., Schiavon R., Rigobello C., Policriti A., Clepet C., Casagrande A., Choisne N., Vezzi A., Hugueney P., Horner D., Mica E., Cattonaro F., Del Fabbro C. expand/collapse author list , Alaux M., Di Gaspero G., Scalabrin S., Pesole G., Delledonne M., Pezzotti M., Pe E.M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P., Morgante M., Valle G.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM442791 Genomic DNA. Translation: CAN65137.1.
FN595227 Genomic DNA. Translation: CBI19005.3.
RefSeqXP_002285863.1. XM_002285827.1.
UniGeneVvi.12266.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGA5B0X9.

Proteomic databases

PRIDEA5B0X9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsVv18s0001g02550.t01; Vv18s0001g02550.t01; Vv18s0001g02550.
GeneID100264314.
KEGGvvi:100264314.

Phylogenomic databases

GeneTreeEPGT00050000017638.
HOGENOMHBG285270.
OMAFTSHGHD.
PhylomeDBA5B0X9.
ProtClustDBCLSN2679842.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR001731. Porphobilinogen_synth.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01698.
PANTHERPTHR11458. AlaD_dehydratase. 1 hit.
PfamPF00490. ALAD. 1 hit.
[Graphical view]
PRINTSPR00144. DALDHYDRTASE.
SMARTSM01004. ALAD. 1 hit.
[Graphical view]
PROSITEPS00169. D_ALA_DEHYDRATASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5B0X9_VITVI
AccessionPrimary (citable) accession number: A5B0X9
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: January 25, 2012
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info