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A5AH72 (A5AH72_VITVI) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:VIT_12s0028g02180 EMBL CCB47365.1
ORF Names:VITISV_018739 EMBL CAN77927.1
OrganismVitis vinifera (Grape) [Reference proteome] EMBL CAN77927.1
Taxonomic identifier29760 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis

Protein attributes

Sequence length965 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequences

Sequence LengthMass (Da)Tools
A5AH72 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: EB8C06B49B50523F

FASTA965110,322
        10         20         30         40         50         60 
MAARNLEKMA SIDAQLRLLA PAKVSEDDKL VEYDALLLDR FLDILQEIHG EDLKETVQEC 

        70         80         90        100        110        120 
YELSAEYEGK HDPQKLEELG RVITSLDAGD SIVVAKSFSN MLTLANLAEE VQIAFRRRIK 

       130        140        150        160        170        180 
LKKGDFHDES SATTESDIEE TIKRLVVQLK KSPEEVFDAL KNQTVDLVLT AHPTQSVRRS 

       190        200        210        220        230        240 
LLQKHARIRN CLAQLYAKDI TPDDKQELDE ALQREIQAAF RTDEIRRTAP TPQDEMRAGM 

       250        260        270        280        290        300 
SYFHETIWKG VPKFLRRVDT ALKNIGIDER VPYNAPLIQF SSWMGGDRDG NPRVTPEVTR 

       310        320        330        340        350        360 
DVCLLARMMA ANLYYSQIED LMFELSMWRC NEELRARADE LHRSSRRDAK HYIEFWKQVP 

       370        380        390        400        410        420 
PSEPYRVILG DVRDKLYSTR ERSRQLLSSG ISEIPEEAAF TNVEQFLEPL ELCYRSLCAC 

       430        440        450        460        470        480 
GDRPIADGSL LDFLRQVSTF GLSLVRLDIR QESDRHTDVM DAITKHLEIG SYREWSEERR 

       490        500        510        520        530        540 
QEWLLAELRG KRPLFGPDLP KTEEIADVLD TFHVISELPS DNFGAYIISM ATAPSDVLAV 

       550        560        570        580        590        600 
ELLQRECHVK KPLRVVPLFE KLADLEAAPA AVARLFSIDW YRNRIDGKQE VMIGYSDSGK 

       610        620        630        640        650        660 
DAGRFSAAWQ LYKAQEALVK VAKQYGVKLT MFHGRGGTVG RGGGPTHLAI LSQPPDTIHG 

       670        680        690        700        710        720 
SLRVTVQGEV IEQSFGEEHL CFRTLQRFTA ATLEHGMHPP VSPKPEWRAL MDEMAVIATK 

       730        740        750        760        770        780 
EYRSIVFQEP RFVEYFRLAT PELEYGRMNI GSRPSKRKPS GGIESLRAIP WIFAWTQTRF 

       790        800        810        820        830        840 
HLPVWLGFGG AFKHVIGRDP RNLPMLQQMY NEWPFFRVTI DLVEMVFAKG DPGIAALYDR 

       850        860        870        880        890        900 
LLVSEELWLF GKRLRTNYEE TKRLLLQIAG HRDLLEGDPY LKQRLRLRDA YITTLNVCQA 

       910        920        930        940        950        960 
YTLKRIRDPN YHVMERPHLS KEIMESSKPA AELVKLNPTS EYAPGMEDTL ILTMKGIAAG 


LQNTG 

« Hide

References

« Hide 'large scale' references
[1]"The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
The French-Italian Public Consortium for Grapevine Genome Characterization.
Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J. expand/collapse author list , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Pinot noir / PN40024.
[2]"The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome."
Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A., Pruss D., Pindo M., FitzGerald L.M., Vezzulli S., Reid J., Malacarne G., Iliev D., Coppola G., Wardell B., Micheletti D., Macalma T., Facci M., Mitchell J.T. expand/collapse author list , Perazzolli M., Eldredge G., Gatto P., Oyzerski R., Moretto M., Gutin N., Stefanini M., Chen Y., Segala C., Davenport C., Dematte L., Mraz A., Battilana J., Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T., Lackey A., Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A., Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C., Lanchbury J., Bogden R., Skolnick M., Sgaramella V., Bhatnagar S.K., Fontana P., Gutin A., Van de Peer Y., Salamini F., Viola R.
PLoS ONE 2:e1326-e1326(2007)
Cited for: NUCLEOTIDE SEQUENCE.
[3]"High quality assembly and annotation of grapevine genome."
Vitulo N., Olivier J., Forcato C., Albiero A., D'Angelo M., Zimbello R., Schiavon R., Rigobello C., Policriti A., Clepet C., Casagrande A., Choisne N., Vezzi A., Hugueney P., Horner D., Mica E., Cattonaro F., Del Fabbro C. expand/collapse author list , Alaux M., Di Gaspero G., Scalabrin S., Pesole G., Delledonne M., Pezzotti M., Pe E.M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P., Morgante M., Valle G.
Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM426708 Genomic DNA. Translation: CAN77927.1.
FN595235 Genomic DNA. Translation: CCB47365.1.
RefSeqXP_002280569.1. XM_002280533.2.
UniGeneVvi.5.

3D structure databases

ProteinModelPortalA5AH72.
SMRA5AH72. Positions 31-965.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING29760.GSVIVG00018735001.

Proteomic databases

PRIDEA5AH72.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsVIT_12s0028g02180.t01; VIT_12s0028g02180.t01; VIT_12s0028g02180.
GeneID100233103.
KEGGvvi:100233103.

Phylogenomic databases

eggNOGCOG2352.
HOGENOMHOG000238648.
KOK01595.
ProtClustDBCLSN2679806.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 2 hits.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5AH72_VITVI
AccessionPrimary (citable) accession number: A5AH72
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: April 16, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)