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Protein

Uncharacterized protein YtcA

Gene

ytcA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-2830.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YtcA
Gene namesi
Name:ytcA
Ordered Locus Names:b4622
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14401. ytcA.

Subcellular locationi

  • Cell membrane PROSITE-ProRule annotation; Lipid-anchor PROSITE-ProRule annotation
  • Membrane Curated; Multi-pass membrane protein Curated

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei33 – 5321HelicalSequence analysisAdd
BLAST
Transmembranei70 – 9021HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2626PROSITE-ProRule annotationAdd
BLAST
Chaini27 – 9165Uncharacterized protein YtcAPRO_0000311868Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Lipidationi27 – 271N-palmitoyl cysteinePROSITE-ProRule annotation
Lipidationi27 – 271S-diacylglycerol cysteinePROSITE-ProRule annotation

Keywords - PTMi

Lipoprotein, Palmitate

Proteomic databases

PaxDbiA5A630.

Interactioni

Protein-protein interaction databases

STRINGi511145.b4622.

Structurei

3D structure databases

ProteinModelPortaliA5A630.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the YtcA family.Curated

Keywords - Domaini

Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4106833. Bacteria.
ENOG410XV8F. LUCA.
HOGENOMiHOG000009677.
OMAiAFPGWFF.

Family and domain databases

InterProiIPR031381. YtcA.
[Graphical view]
PfamiPF17090. Ytca. 1 hit.
[Graphical view]
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A5A630-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPTVLSRMAM QLKKTAWIIP VFMVSGCSLS PAIPVIGAYY PSWFFCAIAS
60 70 80 90
LILTLITRRV IQRANINLAF VGIIYTALFA LYAMLFWLAF F
Length:91
Mass (Da):10,257
Last modified:May 29, 2007 - v1
Checksum:i36C1C21913954A00
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: ABP93459.1.
RefSeqiWP_001295389.1. NZ_LN832404.1.
YP_001165334.1. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiABP93459; ABP93459; b4622.
GeneIDi5061530.
KEGGieco:b4622.
PATRICi32123719. VBIEscCol129921_4208.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: ABP93459.1.
RefSeqiWP_001295389.1. NZ_LN832404.1.
YP_001165334.1. NC_000913.3.

3D structure databases

ProteinModelPortaliA5A630.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi511145.b4622.

Proteomic databases

PaxDbiA5A630.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP93459; ABP93459; b4622.
GeneIDi5061530.
KEGGieco:b4622.
PATRICi32123719. VBIEscCol129921_4208.

Organism-specific databases

EcoGeneiEG14401. ytcA.

Phylogenomic databases

eggNOGiENOG4106833. Bacteria.
ENOG410XV8F. LUCA.
HOGENOMiHOG000009677.
OMAiAFPGWFF.

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-2830.

Miscellaneous databases

PROiA5A630.

Family and domain databases

InterProiIPR031381. YtcA.
[Graphical view]
PfamiPF17090. Ytca. 1 hit.
[Graphical view]
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYTCA_ECOLI
AccessioniPrimary (citable) accession number: A5A630
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 4, 2007
Last sequence update: May 29, 2007
Last modified: September 7, 2016
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.