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Protein

Uncharacterized protein YpfM

Gene

ypfM

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Keywords - Biological processi

Stress response

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-762.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YpfM
Gene namesi
Name:ypfM
Ordered Locus Names:b4606, JW2454.1
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14396. ypfM.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003118571 – 19Uncharacterized protein YpfMAdd BLAST19

Proteomic databases

PaxDbiA5A621.
PRIDEiA5A621.

Expressioni

Inductioni

Constitutively expressed (PubMed:19121005), increases in stationary phase and at 45 degrees Celsius (PubMed:19121005) (at protein level).2 Publications

Interactioni

Protein-protein interaction databases

STRINGi511145.b4606.

Sequencei

Sequence statusi: Complete.

A5A621-1 [UniParc]FASTAAdd to basket

« Hide

        10 
MIERELGNWK DFIEVMLRK
Length:19
Mass (Da):2,408
Last modified:May 29, 2007 - v1
Checksum:i64DBF1F0130E390F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: ABP93450.1.
AP009048 Genomic DNA. No translation available.
RefSeqiYP_001165325.1. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiABP93450; ABP93450; b4606.
GeneIDi5061513.
KEGGieco:b4606.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: ABP93450.1.
AP009048 Genomic DNA. No translation available.
RefSeqiYP_001165325.1. NC_000913.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi511145.b4606.

Proteomic databases

PaxDbiA5A621.
PRIDEiA5A621.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP93450; ABP93450; b4606.
GeneIDi5061513.
KEGGieco:b4606.

Organism-specific databases

EcoGeneiEG14396. ypfM.

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-762.

Miscellaneous databases

PROiA5A621.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiYPFM_ECOLI
AccessioniPrimary (citable) accession number: A5A621
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 4, 2007
Last sequence update: May 29, 2007
Last modified: November 2, 2016
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.