A5A616 (YNEM_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein YneM

Gene names

Name:	yneM
Ordered Locus Names:	b4599, JW1527.1

Organism

Escherichia coli (strain K12) [Reference proteome] [HAMAP]

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	31 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Subcellular location	Membrane; Single-pass membrane protein Ref.3.
Induction	Expressed during exponential phase (at protein level). Ref.3

Ontologies

Keywords
Cellular component	Membrane
Domain	Transmembrane Transmembrane helix
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from direct assay PubMed 21778229. Source: EcoCyc
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 31	31	Uncharacterized protein YneM		PRO_0000311788
Regions
	Transmembrane	5 – 25	21	Helical; Potential

Sequences

	Sequence		Length	Mass (Da)
	A5A616 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: 97E32C3AD73DD3B0	FASTA	31	3,509
	10 20 30 MLGNMNVFMA VLGIILFSGF LAAYFSHKWD D

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[2]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[3]	"Small membrane proteins found by comparative genomics and ribosome binding site models." Hemm M.R., Paul B.J., Schneider T.D., Storz G., Rudd K.E. Mol. Microbiol. 70:1487-1501(2008) [PubMed] [Europe PMC] [Abstract] Cited for: SUBCELLULAR LOCATION, INDUCTION. Strain: K12 / MG1655 / ATCC 47076.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00096 Genomic DNA. Translation: ABP93445.1. AP009048 Genomic DNA. No translation available.
RefSeq	YP_001165319.1. NC_000913.2.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	511145.b4599.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABP93445; ABP93445; b4599.
GeneID	5061497.
KEGG	eco:b4599.
PATRIC	32118368. VBIEscCol129921_1604.
Organism-specific databases
EcoGene	EG14395. yneM.
Phylogenomic databases
eggNOG	NOG258305.
HOGENOM	HOG000009467.
ProtClustDB	CLSK932488.
Enzyme and pathway databases
BioCyc	EcoCyc:MONOMER0-766.
Gene expression databases
Genevestigator	A5A616.
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

YNEM_ECOLI

Accession

Primary (citable) accession number: A5A616

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 4, 2007
Last sequence update:	May 29, 2007
Last modified:	May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program