Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Uncharacterized protein YneM

Gene

yneM

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Keywords - Biological processi

Stress response

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-766.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YneM
Gene namesi
Name:yneM
Ordered Locus Names:b4599, JW1527.1
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14395. yneM.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 44Periplasmic1 Publication
Transmembranei5 – 2521HelicalSequence analysisAdd
BLAST
Topological domaini26 – 316Cytoplasmic1 Publication

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 3131Uncharacterized protein YneMPRO_0000311788Add
BLAST

Proteomic databases

PaxDbiA5A616.

Expressioni

Inductioni

Expressed during exponential phase (PubMed:19121005), induced by SDS/EDTA (envelope stress), at 45 degrees Celsius, repressed in minimal glucose or glycerol medium and by the thiol oxidant diamide (PubMed:19734316) (at protein level).2 Publications

Interactioni

Protein-protein interaction databases

STRINGi511145.b4599.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000009467.

Sequencei

Sequence statusi: Complete.

A5A616-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30 
MLGNMNVFMA VLGIILFSGF LAAYFSHKWD D
Length:31
Mass (Da):3,509
Last modified:May 29, 2007 - v1
Checksum:i97E32C3AD73DD3B0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: ABP93445.1.
AP009048 Genomic DNA. No translation available.
RefSeqiWP_000901367.1. NZ_LN832404.1.
YP_001165319.1. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiABP93445; ABP93445; b4599.
GeneIDi5061497.
KEGGieco:b4599.
PATRICi32118368. VBIEscCol129921_1604.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: ABP93445.1.
AP009048 Genomic DNA. No translation available.
RefSeqiWP_000901367.1. NZ_LN832404.1.
YP_001165319.1. NC_000913.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi511145.b4599.

Proteomic databases

PaxDbiA5A616.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP93445; ABP93445; b4599.
GeneIDi5061497.
KEGGieco:b4599.
PATRICi32118368. VBIEscCol129921_1604.

Organism-specific databases

EcoGeneiEG14395. yneM.

Phylogenomic databases

HOGENOMiHOG000009467.

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-766.

Miscellaneous databases

PROiA5A616.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiYNEM_ECOLI
AccessioniPrimary (citable) accession number: A5A616
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 4, 2007
Last sequence update: May 29, 2007
Last modified: September 7, 2016
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.