A5A5E0 (A5A5E0_9CAUD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lysin EMBL ABP88927.1

Gene names

ORF Names:

CU5_26 EMBL ABP88927.1

Organism

Lactobacillus phage phiPYB5 EMBL ABP88927.1

Taxonomic identifier

438780 [NCBI]

Taxonomic lineage

Viruses › dsDNA viruses, no RNA stage › Caudovirales › Siphoviridae › unclassified Siphoviridae

Protein attributes

Sequence length	418 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	lysozyme activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5A5E0 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: 3499EEE0A870223A	FASTA	418	45,117
	10 20 30 40 50 60 MQKMKMIKRG AASVAIALLL LPLSGTAHAT TVKHYGVDWS KYQGNNGKWG YDRDDFSVSQ 70 80 90 100 110 120 IGGYYNGYFV DQTTYGTQVA NTIALNKRAH TYIYAQFSGT AQADQMLDYY LPKVQTPKGS 130 140 150 160 170 180 IVALDVESGN PDLASVEYAL QRVQDAGYTA VLYGYKGFLV NHLGSAGLQE IASQWPLWLA 190 200 210 220 230 240 EYKDYQVASE PDYNYFPSFN NVQLFQFTST YVSGGLDGNV DFTGITENGY KGGDAQKPKT 250 260 270 280 290 300 TTPAITTGKQ LHQDTHNYTV RYGDTLSAIA SRYGMTVNAL VTLNGIQNAN LIYPGQVLRV 310 320 330 340 350 360 ADSGAGSTVT NKATTPITST GTQAYTVRYG DTLSGIASRY GTSTSTLASL NGISNPNWIY 370 380 390 400 410 PGQVLKLSGG SSARSYTVRS GDTLSGIASR LGTSWTALKA KNGLANANLI YPGQTLYY

References

[1]	"Identification and characterization of the two-component cell lysis cassette encoded by temperate bacteriophage phiPYB5 of Lactobacillus fermentum." Wang S., Kong J., Zhang X. J. Appl. Microbiol. 105:1939-1944(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Genome analysis of Lactobacillus fermentum temperate bacteriophage ?PYB5." Zhang X., Wang S., Guo T., Kong J. Int. J. Food Microbiol. 144:400-405(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GU323708 Genomic DNA. Translation: ABP88927.1.
3D structure databases
ProteinModelPortal	A5A5E0.
ModBase	Search...
Protein family/group databases
CAZy	CBM50. Carbohydrate-Binding Module Family 50. GH25. Glycoside Hydrolase Family 25.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
Gene3D	3.20.20.80. 1 hit.
InterPro	IPR002053. Glyco_hydro_25. IPR013781. Glyco_hydro_catalytic_dom. IPR017853. Glycoside_hydrolase_SF. IPR018392. Peptidoglycan-bd_lysin. IPR002482. Peptidoglycan-bd_Lysin_subgr. [Graphical view]
Pfam	PF01183. Glyco_hydro_25. 1 hit. PF01476. LysM. 3 hits. [Graphical view]
SMART	SM00257. LysM. 3 hits. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5A5E0_9CAUD

Accession

Primary (citable) accession number: A5A5E0

Entry history

Integrated into UniProtKB/TrEMBL:	May 29, 2007
Last sequence update:	May 29, 2007
Last modified:	May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)