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A4Z011

- A4Z011_BRASO

UniProt

A4Z011 - A4Z011_BRASO

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Protein
Submitted name: Putative ATP-dependent DNA ligase
Gene
BRADO5823
Organism
Bradyrhizobium sp. (strain ORS278)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBSP114615:GJN5-5564-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:BRADO5823Imported
OrganismiBradyrhizobium sp. (strain ORS278)Imported
Taxonomic identifieri114615 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
ProteomesiUP000001994: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi114615.BRADO5823.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiNGLPDFQ.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4Z011-1 [UniParc]FASTAAdd to Basket

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MALKKLSTYR KKRDFEKTAE PSGDARIAPA ARPRFVIQKH DATRLHYDLR    50
LEFDGVFKSW AVTKGPSLDP HDKRLAVEVE DHPLDYGDFE GTIPEGEYGG 100
GTVMLWDRGY WESDDPERGF TKGDLKFTLE GEKLHGSWVL VRMRHDRTGG 150
KRTNWLLIKH RDEFAREGAA NDVLDADKSV ASGRTMEQIA AGKGRAPKPF 200
MLAKRQRMNA DAIWHSNRSD GETKTSKVST KAASSRTKAA KAGRAKSSRV 250
SKMAEPKTVS SLPDFVPPEL CTSVAQPPSG EGWAHEIKFD GYRVQIRVED 300
GQAALKTRKG LDWTAKFGVI AEAAAKLPDA IIDGEIVALD KDGNPNFSAL 350
QAAISAGQTD ELVFFAFDLM FVEEFDLRRQ PLRERKARLA KLLKANIKGK 400
TPVIRYVEHF ESDGEAVLES ARKLSLEGIV SKKLDSAYHS GRTESWTKAK 450
TRPGHEVVVG GWKTTNGKFR SLMVGVNKDD HLAYVGIVGT GFGQDTVKAI 500
MPALKAAASD KSPFSGKNAP RKAREVHWLK PELVAEIEFA GFTGDGNVRQ 550
ASFKGLRQDK PAREVVAEEP VVAAKVTKPV ARAAATVATG GTTVHKTPSR 600
TKGAATVMGV AISKPDKALW PDAGDGEPVT KLDLATYLEA VGDWMIEHLK 650
GRPCSIVRAP DGIGGERFFQ RHGMQGMSDL LELVKVSGDR KPYLQIDRVE 700
GLIAVAQVAA VELHPWNCAP DAYDVPGRLV FDLDPAPNVA FEEVIAAAKE 750
MRQRLKTLGL ESFCKTTGGK GLHVVTPLLH GARDQVTWPE AKAFAQGVCQ 800
WMANDSPDDY LLNMSKKLRK GKIFLDYLRN DRMSTAVAVL SPRAREGATV 850
SMPVTWAQVK NGLDPKRYTI RTVPALLAKT KAWDGYDDAA GAIRPAIRKL 900
TDTL 904
Length:904
Mass (Da):99,183
Last modified:May 29, 2007 - v1
Checksum:iAD28102C5609AF33
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CU234118 Genomic DNA. Translation: CAL79487.1.
RefSeqiWP_012029390.1. NC_009445.1.
YP_001207704.1. NC_009445.1.

Genome annotation databases

EnsemblBacteriaiCAL79487; CAL79487; BRADO5823.
GeneIDi5115558.
KEGGibra:BRADO5823.
PATRICi21227589. VBIBraSp122330_5591.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CU234118 Genomic DNA. Translation: CAL79487.1 .
RefSeqi WP_012029390.1. NC_009445.1.
YP_001207704.1. NC_009445.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 114615.BRADO5823.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAL79487 ; CAL79487 ; BRADO5823 .
GeneIDi 5115558.
KEGGi bra:BRADO5823.
PATRICi 21227589. VBIBraSp122330_5591.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi NGLPDFQ.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci BSP114615:GJN5-5564-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ORS278Imported.

Entry informationi

Entry nameiA4Z011_BRASO
AccessioniPrimary (citable) accession number: A4Z011
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: September 3, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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