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A4YZK0 (A4YZK0_BRASO) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
D-alanine-D-alanine ligase, affects cell division EMBL CAL79326.1
EC=6.3.2.4 EMBL CAL79326.1
Gene names
Name:ddlB EMBL CAL79326.1
Ordered Locus Names:BRADO5656
OrganismBradyrhizobium sp. (strain ORS278) [Complete proteome] [HAMAP]
Taxonomic identifier114615 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium

Protein attributes

Sequence length329 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Cell wall formation By similarity. SAAS SAAS005905

Catalytic activity

ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine. SAAS SAAS005905

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity. SAAS SAAS005905

Pathway

Cell wall biogenesis; peptidoglycan biosynthesis. SAAS SAAS005905

Subcellular location

Cytoplasm By similarity SAAS SAAS005905.

Sequence similarities

Contains 1 ATP-grasp domain. SAAS SAAS005905

Sequences

Sequence LengthMass (Da)Tools
A4YZK0 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: D5388FBD6E0ABEE0

FASTA32934,796
        10         20         30         40         50         60 
MRTTILFGGS NKERLVSVAS AKALHAALPE ADLWFWEADD TVQQASGPAL VAHAKPFEEP 

        70         80         90        100        110        120 
FTADGVRIGT LAEALDRARA EDRILVLGLH GGRAENGELQ VMCEMRGVPF TGSSSAASHL 

       130        140        150        160        170        180 
AFDKVAAKRF AVLGGVTAAE GVALDNAETA LARYGKLIAK PVKDGSSFGL IFVNAKQDLV 

       190        200        210        220        230        240 
AVKAAAATEE YLIEPFVTGK EATCGVLEQA DGSLIALPPI EILPADGAFN YFAKYLAAAT 

       250        260        270        280        290        300 
KEICPGRFNP EVTAALQREA IKAHRALSCG GYSRTDFIVS ADGPVYLETN TLPGLTAASL 

       310        320 
YPKALAAQGI PFADFLQQQI ALAERRVRH

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CU234118 Genomic DNA. Translation: CAL79326.1.
RefSeqYP_001207543.1. NC_009445.1.

3D structure databases

ProteinModelPortalA4YZK0.
ModBaseSearch...

Protein-protein interaction databases

STRING114615.BRADO5656.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAL79326; CAL79326; BRADO5656.
GeneID5120086.
KEGGbra:BRADO5656.
PATRIC21227271. VBIBraSp122330_5432.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1181.
HOGENOMHOG000011592.
KOK01921.
OMANVAPGMT.
ProtClustDBCLSK911593.

Enzyme and pathway databases

BioCycBSP114615:GJN5-5401-MONOMER.
UniPathwayUPA00219.

Family and domain databases

Gene3D3.30.1490.20. 1 hit.
3.30.470.20. 2 hits.
3.40.50.20. 1 hit.
InterProIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR011127. Dala_Dala_lig_N.
IPR016185. PreATP-grasp_dom.
[Graphical view]
PANTHERPTHR23132. PTHR23132. 1 hit.
PfamPF07478. Dala_Dala_lig_C. 1 hit.
PF01820. Dala_Dala_lig_N. 1 hit.
[Graphical view]
SUPFAMSSF52440. PreATP-grasp-like. 1 hit.
PROSITEPS50975. ATP_GRASP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4YZK0_BRASO
AccessionPrimary (citable) accession number: A4YZK0
Entry history
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: May 1, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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