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A4YVD6 (TRPC_BRASO) Reviewed, UniProtKB/Swiss-Prot

Last modified December 14, 2011. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Indole-3-glycerol phosphate synthase
Short name=IGPS
EC=4.1.1.48
Gene names
Name:trpC
Ordered Locus Names:BRADO4110
OrganismBradyrhizobium sp. (strain ORS278) [Complete proteome] [HAMAP]
Taxonomic identifier114615 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium

Protein attributes

Sequence length272 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate = 1-C-(3-indolyl)-glycerol 3-phosphate + CO2 + H2O. HAMAP MF_00134_B

Pathway

Amino-acid biosynthesis; L-tryptophan biosynthesis; L-tryptophan from chorismate: step 4/5. HAMAP MF_00134_B

Sequence similarities

Belongs to the TrpC family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 272272Indole-3-glycerol phosphate synthase HAMAP MF_00134_B
PRO_1000018447

Sequences

Sequence LengthMass (Da)Tools
A4YVD6 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: A92DA01C6C78BD0A

FASTA27229,080
        10         20         30         40         50         60 
MSDILAKIEA YKREEIAAAK QACPLSELEA RAREASAPRG FVKALRSKHA SGDYALIAEV 

        70         80         90        100        110        120 
KKASPSKGLI RADFDPPVLA RAYEAGGAAC LSVLTDTPSF QGHLDFMVAA RAATALPVLR 

       130        140        150        160        170        180 
KDFMFDTYQV IEARAHGADC ILIIMAALDD AAAADIEMAA LDSGMDVLIE IHDRAELDRA 

       190        200        210        220        230        240 
LKLRSPMIGI NNRNLRTFET TLATSESLAP LVPKERLLVG ESGIFTPADL SRLAQVDIQT 

       250        260        270 
FLVGESLMRQ ADVTAATRAL LARNAASASA AE

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CU234118 Genomic DNA. Translation: CAL77862.1.
RefSeqYP_001206087.1. NC_009445.1.

3D structure databases

ProteinModelPortalA4YVD6.
ModBaseSearch...

Protein-protein interaction databases

STRINGA4YVD6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5117874.
GenomeReviewsGene locus BRADO4110 in contig CU234118_GR.
KEGGbra:BRADO4110.
PATRIC21224299. VBIBraSp122330_3957.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0134.
HOGENOMHBG540956.
OMAVESLGMT.
ProtClustDBPRK00278.

Enzyme and pathway databases

BioCycBSP376:BRADO4110-MONOMER.

Family and domain databases

HAMAPMF_00134_B. IGPS_B.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR013798. Indole-3-glycerol_P_synth.
IPR001468. Indole-3-GlycerolPSynthase_CS.
IPR011060. RibuloseP-bd_barrel.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01609.
PfamPF00218. IGPS. 1 hit.
[Graphical view]
SUPFAMSSF51366. RibP_bind_barrel. 1 hit.
PROSITEPS00614. IGPS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameTRPC_BRASO
AccessionPrimary (citable) accession number: A4YVD6
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: May 29, 2007
Last modified: December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

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