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A4YTV9 (A4YTV9_BRASO) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA topoisomerase IV, subunit B EMBL CAL77335.1
EC=5.99.1.3 EMBL CAL77335.1
Gene names
Name:parE EMBL CAL77335.1
Ordered Locus Names:BRADO3555
OrganismBradyrhizobium sp. (strain ORS278) [Complete proteome] [HAMAP]
Taxonomic identifier114615 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium

Protein attributes

Sequence length691 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the type II topoisomerase family. RuleBase RU000380

Sequences

Sequence LengthMass (Da)Tools
A4YTV9 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: 21345C65D49883BB

FASTA69175,579
        10         20         30         40         50         60 
MGKPLKSAAK AKAKGVADPL AAFAAKGKAQ TKHQAKPAAR AAGSEGEYTA RDIEVLEGLE 

        70         80         90        100        110        120 
PVRRRPGMYI GGTDEKALHH LFAEVIDNSM DEALAGHATF IEVELDAQGF LTVTDNGRGI 

       130        140        150        160        170        180 
PIDPHPKFPK KSALEIIMCT LHAGGKFDSK VYETSGGLHG VGISVVNALS TRLEVEVARN 

       190        200        210        220        230        240 
QKLYRMIFER GHPKGKLEEV GKAPNRRGTK VRFQPDPTIF GAKATFKPQR LFKMARSKAY 

       250        260        270        280        290        300 
LFGGVEIRWK CDPSLLKGIE DVQPEATFHF PGGLKDYLAA AIHADTLVHP DIFAGKSGRT 

       310        320        330        340        350        360 
GGHGGCEWAV AWTADADGFL SSYCNTIPTP DGGTHESGIR SALLRGLKDH AERVGQGKRS 

       370        380        390        400        410        420 
ANITSEDIMA GAAIMLSVFV REPEFQGQTK DRLATAEAQR IVEQAVKDPF DHWLSGNPVQ 

       430        440        450        460        470        480 
ANRLLDFVVE RAEERIRRRQ EKETARKTAT KKLRLPGKLA DCTDAGTEGS ELFIVEGDSA 

       490        500        510        520        530        540 
GGSAKQARDR KKQAVLPLRG KILNVASAGK DKLTANAQLA DLVMAIGAGT GTSYREEDLR 

       550        560        570        580        590        600 
YQRIIIMTDA DVDGAHIASL LITFFYRQMP RLIDEGHLYL AVPPLYRLTH GSKTFYARDD 

       610        620        630        640        650        660 
AHRDELLRRE FNANAKVEIG RFKGLGEMMP AQLKETTMDP AKRTLLRVML LADDRDGTAD 

       670        680        690 
SVERLMGTKA EARFAFISEK AEFASDELLD V

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CU234118 Genomic DNA. Translation: CAL77335.1.
RefSeqYP_001205561.1. NC_009445.1.

3D structure databases

ProteinModelPortalA4YTV9.
ModBaseSearch...

Protein-protein interaction databases

STRINGA4YTV9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5120773.
GenomeReviewsGene locus BRADO3555 in contig CU234118_GR.
KEGGbra:BRADO3555.
PATRIC21223251. VBIBraSp122330_3441.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0187.
HOGENOMHBG304889.
OMAQARDKEF.
ProtClustDBPRK05559.

Family and domain databases

InterProIPR003594. ATPase-like_ATP-bd.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR001241. Topo_IIA.
IPR013759. Topo_IIA_B/N_ab.
IPR002288. Topo_IIA_B_C.
IPR013506. Topo_IIA_bsu_dom2.
IPR013760. Topo_IIA_cen.
IPR018522. TopoIIA_CS.
IPR005737. TopoIV_B_Gneg.
IPR006171. Toprim_domain.
[Graphical view]
Gene3DG3DSA:3.30.565.10. ATP_bd_ATPase. 1 hit.
G3DSA:3.30.230.10. Ribosomal_S5_D2-type_fold. 1 hit.
G3DSA:3.40.50.670. Topo_IIA_B/N_ab. 1 hit.
KOK02622.
PfamPF00204. DNA_gyraseB. 1 hit.
PF00986. DNA_gyraseB_C. 1 hit.
PF02518. HATPase_c. 1 hit.
PF01751. Toprim. 1 hit.
[Graphical view]
PRINTSPR00418. TPI2FAMILY.
SMARTSM00387. HATPase_c. 1 hit.
SM00433. TOP2c. 1 hit.
[Graphical view]
SUPFAMSSF55874. ATP_bd_ATPase. 1 hit.
SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
SSF56719. Topo_IIA_cen. 1 hit.
TIGRFAMsTIGR01055. ParE_Gneg. 1 hit.
PROSITEPS00177. TOPOISOMERASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4YTV9_BRASO
AccessionPrimary (citable) accession number: A4YTV9
Entry history
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: January 25, 2012
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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