Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

A4YRL1

- TYPH_BRASO

UniProt

A4YRL1 - TYPH_BRASO

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Putative thymidine phosphorylase

Gene

BRADO2724

Organism
Bradyrhizobium sp. (strain ORS278)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Thymidine + phosphate = thymine + 2-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

GO - Molecular functioni

  1. phosphorylase activity Source: InterPro
  2. thymidine phosphorylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. pyrimidine nucleobase metabolic process Source: InterPro
  2. pyrimidine nucleoside metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Enzyme and pathway databases

BioCyciBSP114615:GJN5-2582-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative thymidine phosphorylaseUniRule annotation (EC:2.4.2.4UniRule annotation)
Alternative name(s):
TdRPaseUniRule annotation
Gene namesi
Ordered Locus Names:BRADO2724
OrganismiBradyrhizobium sp. (strain ORS278)
Taxonomic identifieri114615 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
ProteomesiUP000001994: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 509509Putative thymidine phosphorylasePRO_0000314698Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi114615.BRADO2724.

Structurei

3D structure databases

ProteinModelPortaliA4YRL1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0213.
HOGENOMiHOG000252767.
KOiK00758.
OrthoDBiEOG61ZTGG.

Family and domain databases

Gene3Di3.40.1030.10. 1 hit.
3.90.1170.30. 1 hit.
HAMAPiMF_00703. Thymid_phosp_2.
InterProiIPR000312. Glycosyl_Trfase_fam3.
IPR017459. Glycosyl_Trfase_fam3_N_dom.
IPR013102. PYNP_C.
IPR000053. Pyrmidine_PPase.
IPR017872. Pyrmidine_PPase_CS.
IPR028579. Thym_Pase_Put.
IPR013466. Thymidine/AMP_Pase.
[Graphical view]
PANTHERiPTHR10515. PTHR10515. 1 hit.
PfamiPF02885. Glycos_trans_3N. 1 hit.
PF00591. Glycos_transf_3. 1 hit.
PF07831. PYNP_C. 1 hit.
[Graphical view]
PIRSFiPIRSF000478. TP_PyNP. 1 hit.
SMARTiSM00941. PYNP_C. 1 hit.
[Graphical view]
SUPFAMiSSF47648. SSF47648. 1 hit.
SSF52418. SSF52418. 1 hit.
SSF54680. SSF54680. 1 hit.
TIGRFAMsiTIGR02645. ARCH_P_rylase. 1 hit.
PROSITEiPS00647. THYMID_PHOSPHORYLASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4YRL1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSPADTARPQ LKIRSVALDT GRENVVVISR RSRALRPEVF SGFSRVELRC
60 70 80 90 100
NSRTLLATLL ITDDDALVGP DEIGLSEPAL RRFAEPAGML ATVSPATPPE
110 120 130 140 150
SLEAVRAKIR GETLSDEAIA AVIEDLAHYR YSDMEIAAFL IGSASFMTSG
160 170 180 190 200
ELLALTHAMA NAGTQLTWPE PVVVDKHCIG GIPGNRTSMV VVPIVAAHGL
210 220 230 240 250
TIPKTSSRAI TSPAGTADTM EVLARVNVGA EEMKSIVAAC NGCVIWGGHV
260 270 280 290 300
NLSPADDILI SVERPLSLDT REQMVASILS KKLAAGSTHL LLDLPVGPTA
310 320 330 340 350
KLTSGAEAMR LRKLFEFVGD RFGLKVEVIT TDGRQPIGHG IGPVLEARDV
360 370 380 390 400
MAVLGNEPQA PADLREKSLR LAAHLLEYDP KLRGGAGYSR ARELLDSGAA
410 420 430 440 450
LKQMQKIIDA QGPSAGRSEL GDLAFDVGAA SDGVVSAIDC LRLNRLARTA
460 470 480 490 500
GAPVNKGAGI RLYKKIGDRV DQGEPLYRVF TCDPSEHDLA AAAASANNGY

VLDGPNGPH
Length:509
Mass (Da):53,799
Last modified:January 15, 2008 - v2
Checksum:iAEA6FF85803CA15C
GO

Sequence cautioni

The sequence CAL76537.1 differs from that shown. Reason: Erroneous initiation.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CU234118 Genomic DNA. Translation: CAL76537.1. Different initiation.
RefSeqiWP_011925743.1. NC_009445.1.
YP_001204774.1. NC_009445.1.

Genome annotation databases

EnsemblBacteriaiCAL76537; CAL76537; BRADO2724.
GeneIDi5118650.
KEGGibra:BRADO2724.
PATRICi21221631. VBIBraSp122330_2638.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CU234118 Genomic DNA. Translation: CAL76537.1 . Different initiation.
RefSeqi WP_011925743.1. NC_009445.1.
YP_001204774.1. NC_009445.1.

3D structure databases

ProteinModelPortali A4YRL1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 114615.BRADO2724.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAL76537 ; CAL76537 ; BRADO2724 .
GeneIDi 5118650.
KEGGi bra:BRADO2724.
PATRICi 21221631. VBIBraSp122330_2638.

Phylogenomic databases

eggNOGi COG0213.
HOGENOMi HOG000252767.
KOi K00758.
OrthoDBi EOG61ZTGG.

Enzyme and pathway databases

BioCyci BSP114615:GJN5-2582-MONOMER.

Family and domain databases

Gene3Di 3.40.1030.10. 1 hit.
3.90.1170.30. 1 hit.
HAMAPi MF_00703. Thymid_phosp_2.
InterProi IPR000312. Glycosyl_Trfase_fam3.
IPR017459. Glycosyl_Trfase_fam3_N_dom.
IPR013102. PYNP_C.
IPR000053. Pyrmidine_PPase.
IPR017872. Pyrmidine_PPase_CS.
IPR028579. Thym_Pase_Put.
IPR013466. Thymidine/AMP_Pase.
[Graphical view ]
PANTHERi PTHR10515. PTHR10515. 1 hit.
Pfami PF02885. Glycos_trans_3N. 1 hit.
PF00591. Glycos_transf_3. 1 hit.
PF07831. PYNP_C. 1 hit.
[Graphical view ]
PIRSFi PIRSF000478. TP_PyNP. 1 hit.
SMARTi SM00941. PYNP_C. 1 hit.
[Graphical view ]
SUPFAMi SSF47648. SSF47648. 1 hit.
SSF52418. SSF52418. 1 hit.
SSF54680. SSF54680. 1 hit.
TIGRFAMsi TIGR02645. ARCH_P_rylase. 1 hit.
PROSITEi PS00647. THYMID_PHOSPHORYLASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ORS278.

Entry informationi

Entry nameiTYPH_BRASO
AccessioniPrimary (citable) accession number: A4YRL1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: January 15, 2008
Last modified: October 1, 2014
This is version 46 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3