Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

UPF0102 protein BRADO0179

Gene

BRADO0179

Organism
Bradyrhizobium sp. (strain ORS 278)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciBSP114615:GJN5-173-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0102 protein BRADO0179UniRule annotation
Gene namesi
Ordered Locus Names:BRADO0179
OrganismiBradyrhizobium sp. (strain ORS 278)
Taxonomic identifieri114615 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
Proteomesi
  • UP000001994 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 141141UPF0102 protein BRADO0179PRO_0000336136Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi114615.BRADO0179.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0102 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG41082FP. Bacteria.
COG0792. LUCA.
HOGENOMiHOG000016277.
KOiK07460.
OMAiDIWLARQ.
OrthoDBiPOG091H01KC.

Family and domain databases

Gene3Di3.40.1350.10. 1 hit.
HAMAPiMF_00048. UPF0102. 1 hit.
InterProiIPR011335. Restrct_endonuc-II-like.
IPR011856. tRNA_endonuc-like_dom.
IPR003509. UPF0102.
[Graphical view]
PfamiPF02021. UPF0102. 1 hit.
[Graphical view]
SUPFAMiSSF52980. SSF52980. 1 hit.
TIGRFAMsiTIGR00252. TIGR00252. 1 hit.

Sequencei

Sequence statusi: Complete.

A4YJR8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAETDRATDK PAGAPKPAKT ASPERVAAFR TGLSAEARAA ALLIAKGYRI
60 70 80 90 100
LAKRFRTPHG EIDLIARKRG LVAFVEVKAR ASLDDAAYAV TPRQQQRIID
110 120 130 140
AAQAWLMAHP DHAELELRFD AILVAPRSLP RHLMAAFDAS P
Length:141
Mass (Da):15,332
Last modified:May 29, 2007 - v1
Checksum:iBFCFA1611F54C5C2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU234118 Genomic DNA. Translation: CAL74144.1.
RefSeqiWP_011923436.1. NC_009445.1.

Genome annotation databases

EnsemblBacteriaiCAL74144; CAL74144; BRADO0179.
KEGGibra:BRADO0179.
PATRICi21216682. VBIBraSp122330_0177.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU234118 Genomic DNA. Translation: CAL74144.1.
RefSeqiWP_011923436.1. NC_009445.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi114615.BRADO0179.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAL74144; CAL74144; BRADO0179.
KEGGibra:BRADO0179.
PATRICi21216682. VBIBraSp122330_0177.

Phylogenomic databases

eggNOGiENOG41082FP. Bacteria.
COG0792. LUCA.
HOGENOMiHOG000016277.
KOiK07460.
OMAiDIWLARQ.
OrthoDBiPOG091H01KC.

Enzyme and pathway databases

BioCyciBSP114615:GJN5-173-MONOMER.

Family and domain databases

Gene3Di3.40.1350.10. 1 hit.
HAMAPiMF_00048. UPF0102. 1 hit.
InterProiIPR011335. Restrct_endonuc-II-like.
IPR011856. tRNA_endonuc-like_dom.
IPR003509. UPF0102.
[Graphical view]
PfamiPF02021. UPF0102. 1 hit.
[Graphical view]
SUPFAMiSSF52980. SSF52980. 1 hit.
TIGRFAMsiTIGR00252. TIGR00252. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiY179_BRASO
AccessioniPrimary (citable) accession number: A4YJR8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: May 29, 2007
Last modified: September 7, 2016
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.