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A4YI54 (A4YI54_METS5) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.23 EMBL ABP96106.1
Gene names
Ordered Locus Names:Msed_1966 EMBL ABP96106.1
OrganismMetallosphaera sedula (strain ATCC 51363 / DSM 5348) [Complete proteome] [HAMAP] EMBL ABP96106.1
Taxonomic identifier399549 [NCBI]
Taxonomic lineageArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeMetallosphaera

Protein attributes

Sequence length215 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region139 – 1402Sulfate 1 binding PDB 3VE7
Region191 – 1922Sulfate 2 binding PDB 3VE7

Sites

Binding site1861Sulfate 2 PDB 3VE7

Sequences

Sequence LengthMass (Da)Tools
A4YI54 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: F7D9C7A64F668DCD

FASTA21523,404
        10         20         30         40         50         60 
MNRVILSLDS PIPEETLRKL NGKVAGIKVG WPLLLNLGKE KVKELVGLVD GIKILDLKLA 

        70         80         90        100        110        120 
DIDNTMILIV DELKDITNSF IAHAFVGVEG SLASLSQRVD LFLVLSMSHP GWNDAFYPYL 

       130        140        150        160        170        180 
REVARRVNPK GFVAPATRPS MISRVKGDFP DKLVISPGVG TQGAKPGIAL CHGADYEIVG 

       190        200        210 
RSVYQSADPV RKLEEIVRSQ EEVLSSCEGA KDRGS 

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of the metal-mobilizing, extremely thermoacidophilic archaeon Metallosphaera sedula provides insights into bioleaching-associated metabolism."
Auernik K.S., Maezato Y., Blum P.H., Kelly R.M.
Appl. Environ. Microbiol. 74:682-692(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51363 / DSM 5348.
[2]"Crystal structure of orotidine 5'-monophosphate decarboxylase from Metallosphaera sedula complexed with inhibitor BMP."
Fedorov A.A., Fedorov E.V., Desai B., Gerlt J.A., Almo S.C.
Submitted (JAN-2012) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.54 ANGSTROMS) IN COMPLEX WITH SULFATE.
[3]"Crystal structure of orotidine 5'-monophosphate decarboxylase from Metallosphaera sedula."
Fedorov A.A., Fedorov E.V., Desai B., Gerlt J.A., Almo S.C.
Submitted (JAN-2012) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.45 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000682 Genomic DNA. Translation: ABP96106.1.
RefSeqYP_001192030.1. NC_009440.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3VE7X-ray1.54A/B1-215[»]
3VE9X-ray1.45A/B1-215[»]
ProteinModelPortalA4YI54.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING399549.Msed_1966.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABP96106; ABP96106; Msed_1966.
GeneID5103353.
KEGGmse:Msed_1966.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0284.
HOGENOMHOG000226069.
KOK01591.
OMATEMSHPG.
ProtClustDBCLSK802793.

Enzyme and pathway databases

BioCycMSED399549:GH1O-1997-MONOMER.

Family and domain databases

Gene3D3.20.20.70. 1 hit.
InterProIPR013785. Aldolase_TIM.
IPR001754. OMPdeCOase_dom.
IPR011060. RibuloseP-bd_barrel.
[Graphical view]
PfamPF00215. OMPdecase. 1 hit.
[Graphical view]
SMARTSM00934. OMPdecase. 1 hit.
[Graphical view]
SUPFAMSSF51366. SSF51366. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA4YI54_METS5
AccessionPrimary (citable) accession number: A4YI54
Entry history
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: December 11, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)