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A4Y754 (A4Y754_SHEPC) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
L-arabinose isomerase HAMAP MF_00519
EC=5.3.1.4 HAMAP MF_00519
Gene names
Name:araA HAMAP MF_00519
Ordered Locus Names:Sputcn32_2066
OrganismShewanella putrefaciens (strain CN-32 / ATCC BAA-453) [Complete proteome] [HAMAP] EMBL ABP75787.1
Taxonomic identifier319224 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length505 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the conversion of L-arabinose to L-ribulose By similarity. HAMAP MF_00519 SAAS SAAS003762

Catalytic activity

L-arabinose = L-ribulose. HAMAP MF_00519 SAAS SAAS003762

Cofactor

Binds 1 manganese ion per subunit By similarity. HAMAP MF_00519 SAAS SAAS003762

Pathway

Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 1/3. HAMAP MF_00519 SAAS SAAS003762

Sequence similarities

Belongs to the arabinose isomerase family. HAMAP MF_00519

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding3111Manganese By similarity HAMAP MF_00519
Metal binding3381Manganese By similarity HAMAP MF_00519
Metal binding3541Manganese By similarity HAMAP MF_00519
Metal binding4531Manganese By similarity HAMAP MF_00519

Sequences

Sequence LengthMass (Da)Tools
A4Y754 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: 95ACA1A440A838D6

FASTA50556,259
        10         20         30         40         50         60 
MRESDMKAFK QKQVWFVTGS QDLYGPKVLE QVAKNSEQIV NGFNQSDAIS MEVVYKPTVK 

        70         80         90        100        110        120 
SPREIYAVCQ AANSDENCVG IILWMHTFSP AKMWIAGLNE LSKPFMHLHT QFNAELPWAD 

       130        140        150        160        170        180 
INMNYMNTHQ SAHGCREFGY IGTRMRKERK VVVGHWQTND VQAQVDDWCR AAAGWNESQN 

       190        200        210        220        230        240 
LRIARFGDNM RQVAVTEGDK VAAQIQFGYE VHAYSLGELN DAINAISEND ITAQIDRYAS 

       250        260        270        280        290        300 
EYIISNELFN DEYQLDRLRK EAKIELGLAQ FLKDGEFGAF TNCFENLTGM TGLPGLATQR 

       310        320        330        340        350        360 
LMANGIGYGG EGDWKTAAMV RIMKVMGQGR VGGTSFMEDY TYNFGATDQV LGAHMLEVCP 

       370        380        390        400        410        420 
SIAASKPRLE VHRHTIGVRC DVPRLLFTAK AGPAINVSTI DLGNRFRIIL NELDTVTPPQ 

       430        440        450        460        470        480 
DLPNLPVASA LWEPRPNLSI AAAAWIHAGG AHHSAYSQAI STENIVDFAE MAGAELVIID 

       490        500 
ADTQIRQFKN ELRQNSVYYG LARGL

« Hide

References

[1]"Complete sequence of Shewanella putrefaciens CN-32."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Fredrickson J., Tiedje J., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CN-32 / ATCC BAA-453.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000681 Genomic DNA. Translation: ABP75787.1.
RefSeqYP_001183586.1. NC_009438.1.

3D structure databases

ProteinModelPortalA4Y754.
ModBaseSearch...

Protein-protein interaction databases

STRINGA4Y754.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5079492.
GenomeReviewsGene locus Sputcn32_2066 in contig CP000681_GR.
KEGGspc:Sputcn32_2066.
PATRIC23552958. VBIShePut135485_2156.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2160.
HOGENOMHBG297198.
OMAEVCPTIA.
PhylomeDBA4Y754.
ProtClustDBPRK02929.

Family and domain databases

HAMAPMF_00519. Arabinose_Isome.
[Tree]
InterProIPR024664. Ara_Isoase_C.
IPR004216. Fuc/Ara_isomerase_C.
IPR009015. Fucose_isomerase_N/cen.
IPR003762. Lara_isomerase.
[Graphical view]
KOK01804.
PfamPF11762. Arabinose_Iso_C. 1 hit.
PF02610. Arabinose_Isome. 1 hit.
[Graphical view]
PIRSFPIRSF001478. L-ara_isomerase. 1 hit.
ProDomPD018364. Lara_isomerase. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF50443. Fuc_isomerase_C. 1 hit.
SSF53743. Fuc_isomerase_N. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA4Y754_SHEPC
AccessionPrimary (citable) accession number: A4Y754
Entry history
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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