A4Y739 (A4Y739_SHEPC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Arabinan endo-1,5-alpha-L-arabinosidase EMBL ABP75772.1
EC=3.2.1.99 EMBL ABP75772.1

Gene names

Ordered Locus Names:

Sputcn32_2051

Organism

Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) [Complete proteome] [HAMAP] EMBL ABP75772.1

Taxonomic identifier

319224 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	357 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABP75772.1
Molecular function	Glycosidase EMBL ABP75772.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	arabinan endo-1,5-alpha-L-arabinosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 37	37	Potential EMBL ABP75772.1
	Chain	38 – 357	320	Potential EMBL ABP75772.1		PRO_5000241536

Sequences

	Sequence		Length	Mass (Da)
	A4Y739 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: 5868A6E5BAC5072D	FASTA	357	39,917
	10 20 30 40 50 60 MLRISITARK HLKRHMNKLH CALLIGLMGS IGSVNAKQVS IHDPVMAKEA GNYYLFSTGP 70 80 90 100 110 120 GITYYASTDK VHWALAGRVF DTEPTWARGV APDFNGHLWA PDIIEHDGYF YLYYSISAFG 130 140 150 160 170 180 KNTSAIGVAV NKTLDKNSKD YQWVDKGMVL ESIPHRDAWN AIDPNIIVDE KGTPWMSFGS 190 200 210 220 230 240 FWQGLKLVKL NQDFISLAKP EEWHTLAKLE RPALLNDAEP GPAQIEAPFI YKKDDYYYLF 250 260 270 280 290 300 VSYGLCCRAD DSTYHLAIGR STSVTGPYLD KEGKDMAQGG GSVLLRGTKA WPGLGHNSVY 310 320 330 340 350 QFEGKDYLVF HAYESADKGL QKLKIAELTW NTQGWPVVDP NALTQYKSVL VDPIGNK

References

[1]

"Complete sequence of Shewanella putrefaciens CN-32." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Fredrickson J., Tiedje J., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CN-32 / ATCC BAA-453.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000681 Genomic DNA. Translation: ABP75772.1.
RefSeq	YP_001183571.1. NC_009438.1.
3D structure databases
ProteinModelPortal	A4Y739.
ModBase	Search...
Protein-protein interaction databases
STRING	A4Y739.
Protein family/group databases
CAZy	GH43. Glycoside Hydrolase Family 43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5079477.
GenomeReviews	Gene locus Sputcn32_2051 in contig CP000681_GR.
KEGG	spc:Sputcn32_2051.
NMPDR	fig|319224.13.peg.1871.
PATRIC	23552926. VBIShePut135485_2140.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3507.
HOGENOM	HBG346382.
OMA	ARTRNDI.
ProtClustDB	CLSK845535.
Family and domain databases
InterPro	IPR006710. Glyco_hydro_43. IPR023296. Glyco_hydro_43_beta-prop. IPR016840. Glyco_hydro_43_endo_a_Ara-ase. [Graphical view]
Gene3D	G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
KO	K06113.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
PIRSF	PIRSF026534. Endo_alpha-L-arabinosidase. 1 hit.
SUPFAM	SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A4Y739_SHEPC

Accession

Primary (citable) accession number: A4Y739

Entry history

Integrated into UniProtKB/TrEMBL:	May 29, 2007
Last sequence update:	May 29, 2007
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)