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A4Y690

- A4Y690_SHEPC

UniProt

A4Y690 - A4Y690_SHEPC

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Sputcn32_1748

Organism
Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 42 (01 Oct 2014)
      Sequence version 1 (29 May 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSPUT319224:GHAP-1792-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Sputcn32_1748Imported
    OrganismiShewanella putrefaciens (strain CN-32 / ATCC BAA-453)Imported
    Taxonomic identifieri319224 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000006699: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 3535 PotentialImportedAdd
    BLAST
    Chaini36 – 309274 PotentialImportedPRO_5000241475Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi319224.Sputcn32_1748.

    Structurei

    3D structure databases

    ProteinModelPortaliA4Y690.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000293070.
    KOiK01971.
    OMAiSLVTYRY.
    OrthoDBiEOG60919Q.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    A4Y690-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTHTSQLFLL ISNPFILLRL LLVSLLLVCL LVNANPSAPK IQLATELTAD    50
    KTSYDIREFL ISEKLDGVRG YWTGHRLVTR QGYPINAPVW FTADFPTIPI 100
    DGELWLGRGQ FEAISSLIRQ SSPKEDAWRN VRFMVFDLPK AEGNFEQRYR 150
    LAIKMFAGKS AYIEVIEQFQ LDSIEALYQK LDSLVVLGAE GLMLHRRSAY 200
    YIAGRNPNLM KLKPYFDAEA KVIAHIAGKG QFTGQMGALK VQTSDGRIFS 250
    IGTGFSHAER QHPPAVGTII TYKYLGLTVN GLPRFASFLR VRTDIVESPL 300
    DGGVDRSGQ 309
    Length:309
    Mass (Da):34,582
    Last modified:May 29, 2007 - v1
    Checksum:i5B27428EA2ADAF5D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000681 Genomic DNA. Translation: ABP75473.1.
    RefSeqiYP_001183272.1. NC_009438.1.

    Genome annotation databases

    EnsemblBacteriaiABP75473; ABP75473; Sputcn32_1748.
    GeneIDi5079306.
    KEGGispc:Sputcn32_1748.
    PATRICi23552240. VBIShePut135485_1814.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000681 Genomic DNA. Translation: ABP75473.1 .
    RefSeqi YP_001183272.1. NC_009438.1.

    3D structure databases

    ProteinModelPortali A4Y690.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 319224.Sputcn32_1748.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABP75473 ; ABP75473 ; Sputcn32_1748 .
    GeneIDi 5079306.
    KEGGi spc:Sputcn32_1748.
    PATRICi 23552240. VBIShePut135485_1814.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000293070.
    KOi K01971.
    OMAi SLVTYRY.
    OrthoDBi EOG60919Q.

    Enzyme and pathway databases

    BioCyci SPUT319224:GHAP-1792-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CN-32 / ATCC BAA-453Imported.

    Entry informationi

    Entry nameiA4Y690_SHEPC
    AccessioniPrimary (citable) accession number: A4Y690
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 29, 2007
    Last sequence update: May 29, 2007
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3