Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

A4Y690

- A4Y690_SHEPC

UniProt

A4Y690 - A4Y690_SHEPC

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Sputcn32_1748

Organism
Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSPUT319224:GHAP-1792-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Sputcn32_1748Imported
OrganismiShewanella putrefaciens (strain CN-32 / ATCC BAA-453)Imported
Taxonomic identifieri319224 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000006699: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3535 PotentialImportedAdd
BLAST
Chaini36 – 309274 PotentialImportedPRO_5000241475Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi319224.Sputcn32_1748.

Structurei

3D structure databases

ProteinModelPortaliA4Y690.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000293070.
KOiK01971.
OMAiSLVTYRY.
OrthoDBiEOG60919Q.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A4Y690-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTHTSQLFLL ISNPFILLRL LLVSLLLVCL LVNANPSAPK IQLATELTAD
60 70 80 90 100
KTSYDIREFL ISEKLDGVRG YWTGHRLVTR QGYPINAPVW FTADFPTIPI
110 120 130 140 150
DGELWLGRGQ FEAISSLIRQ SSPKEDAWRN VRFMVFDLPK AEGNFEQRYR
160 170 180 190 200
LAIKMFAGKS AYIEVIEQFQ LDSIEALYQK LDSLVVLGAE GLMLHRRSAY
210 220 230 240 250
YIAGRNPNLM KLKPYFDAEA KVIAHIAGKG QFTGQMGALK VQTSDGRIFS
260 270 280 290 300
IGTGFSHAER QHPPAVGTII TYKYLGLTVN GLPRFASFLR VRTDIVESPL

DGGVDRSGQ
Length:309
Mass (Da):34,582
Last modified:May 29, 2007 - v1
Checksum:i5B27428EA2ADAF5D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000681 Genomic DNA. Translation: ABP75473.1.
RefSeqiYP_001183272.1. NC_009438.1.

Genome annotation databases

EnsemblBacteriaiABP75473; ABP75473; Sputcn32_1748.
GeneIDi5079306.
KEGGispc:Sputcn32_1748.
PATRICi23552240. VBIShePut135485_1814.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000681 Genomic DNA. Translation: ABP75473.1 .
RefSeqi YP_001183272.1. NC_009438.1.

3D structure databases

ProteinModelPortali A4Y690.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 319224.Sputcn32_1748.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABP75473 ; ABP75473 ; Sputcn32_1748 .
GeneIDi 5079306.
KEGGi spc:Sputcn32_1748.
PATRICi 23552240. VBIShePut135485_1814.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000293070.
KOi K01971.
OMAi SLVTYRY.
OrthoDBi EOG60919Q.

Enzyme and pathway databases

BioCyci SPUT319224:GHAP-1792-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CN-32 / ATCC BAA-453Imported.

Entry informationi

Entry nameiA4Y690_SHEPC
AccessioniPrimary (citable) accession number: A4Y690
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: October 29, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3