A4Y678 (A4Y678_SHEPC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cystathionine beta-lyase EMBL ABP75461.1
EC=4.4.1.8 EMBL ABP75461.1

Gene names

Ordered Locus Names:

Sputcn32_1736

Organism

Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) [Complete proteome] [HAMAP] EMBL ABP75461.1

Taxonomic identifier

319224 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	399 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ABP75461.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular amino acid metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	cystathionine beta-lyase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A4Y678 [UniParc]. Last modified May 29, 2007. Version 1. Checksum: 2413F83225DDE548	FASTA	399	43,954
	10 20 30 40 50 60 MTDKHRQATQ IVSLGRDKKW TKGVINPPVF RASTIVFDTM EDMRHAAKNK TNGEMFYGRR 70 80 90 100 110 120 GTPTHFAFQA AIAQLEGGVG TALYPSGAAA ISAALLSFLK AGDHLLMVDS VYEPTRDLCT 130 140 150 160 170 180 HILGGFGIET TYYDPLIGAG IGELIRPNTK VLFLESPGSI TMEVQDVPTL CRIAHEHGLV 190 200 210 220 230 240 TILDNTWASP INSKPFEMGV DISIQAATKY IVGHSDVMIG TATANEKYWP QLREHSYLMG 250 260 270 280 290 300 QTTSPDDVYL AARGLRTLGV RMAQHEKNAM QVANWLKTRP EVDHLRHPAF DTCPGHEFFK 310 320 330 340 350 360 RDFSASNGLF SFVLKRGDAD AVTALVENMS HFKMGFSWGG YESLILGIFG IDRIRSATKW 370 380 390 DPSKPLIRLH IGLEDPADLI ADLSAGFERF NAVLTAKAK

References

[1]

"Complete sequence of Shewanella putrefaciens CN-32." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Fredrickson J., Tiedje J., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CN-32 / ATCC BAA-453.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000681 Genomic DNA. Translation: ABP75461.1.
RefSeq	YP_001183260.1. NC_009438.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A4Y678.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5079294.
GenomeReviews	Gene locus Sputcn32_1736 in contig CP000681_GR.
KEGG	spc:Sputcn32_1736.
NMPDR	fig|319224.13.peg.1586.
PATRIC	23552214. VBIShePut135485_1801.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0626.
HOGENOM	HBG754729.
OMA	REQSYLM.
PhylomeDB	A4Y678.
ProtClustDB	PRK09028.
Family and domain databases
InterPro	IPR000277. Cys/Met-Metab_PyrdxlP-dep_enz. IPR006233. Cys_b_lyase_bac. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KO	K01760.
PANTHER	PTHR11808:SF8. Cys_b_lyase_bac. 1 hit. PTHR11808. Cys_Met_Meta_PP. 1 hit.
Pfam	PF01053. Cys_Met_Meta_PP. 1 hit. [Graphical view]
PIRSF	PIRSF001434. CGS. 1 hit.
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01324. Cysta_beta_ly_B. 1 hit.
PROSITE	PS00868. CYS_MET_METAB_PP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A4Y678_SHEPC

Accession

Primary (citable) accession number: A4Y678

Entry history

Integrated into UniProtKB/TrEMBL:	May 29, 2007
Last sequence update:	May 29, 2007
Last modified:	January 25, 2012
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)