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A4Y4R8 (A4Y4R8_SHEPC) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.2.1.12 EMBL ABP74951.1
Gene names
Ordered Locus Names:Sputcn32_1223 EMBL ABP74951.1
OrganismShewanella putrefaciens (strain CN-32 / ATCC BAA-453) [Complete proteome] [HAMAP] EMBL ABP74951.1
Taxonomic identifier319224 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length336 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1521Nucleophile By similarity PIRSR PIRSR000149-1
Site1791Activates thiol group during catalysis By similarity PIRSR PIRSR000149-4

Sequences

Sequence LengthMass (Da)Tools
A4Y4R8 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: 65DF7E790BCF3D23

FASTA33636,620
        10         20         30         40         50         60 
MTIKIGINGF GRMGRLALRA AWGWEAVEFV QINDPAGDAA TLAHLLTFDS VHGRWQYEAN 

        70         80         90        100        110        120 
AEGDDIIIDG KRIHCTRNKT IGETNWSGCD VVIEASGKMK TKAVLQAYLD QGVKRVVVTA 

       130        140        150        160        170        180 
PVKEEGVLNV VMGVNHQLYD KAIHPIVTAA SCTTNCLAPI VKVIHENLGI VHGSMTTIHD 

       190        200        210        220        230        240 
ITNTQTILDA PHKDLRRARA CGLSLIPTTT GSATAITHIF PELKGKLNGH AVRVPLANAS 

       250        260        270        280        290        300 
LTDCVFEVSR PTTEAEVNRL LKEAADGPLK GILGYEERPL VSVDYKTDPR SSIIDALSTM 

       310        320        330 
IINGTQVKLY AWYDNEWGYA NRTVELARMV GLMDKA 

« Hide

References

[1]"Complete sequence of Shewanella putrefaciens CN-32."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Fredrickson J., Tiedje J., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CN-32 / ATCC BAA-453.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000681 Genomic DNA. Translation: ABP74951.1.
RefSeqYP_001182750.1. NC_009438.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING319224.Sputcn32_1223.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABP74951; ABP74951; Sputcn32_1223.
GeneID5081534.
KEGGspc:Sputcn32_1223.
PATRIC23551081. VBIShePut135485_1254.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0057.
HOGENOMHOG000071679.
KOK00134.
OMASFTTIHD.
OrthoDBEOG66TG3S.
ProtClustDBPRK08955.

Enzyme and pathway databases

BioCycSPUT319224:GHAP-1246-MONOMER.

Family and domain databases

Gene3D3.40.50.720. 1 hit.
InterProIPR020831. GlycerAld/Erythrose_P_DH.
IPR020830. GlycerAld_3-P_DH_AS.
IPR020829. GlycerAld_3-P_DH_cat.
IPR020828. GlycerAld_3-P_DH_NAD(P)-bd.
IPR006424. Glyceraldehyde-3-P_DH_1.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERPTHR10836. PTHR10836. 1 hit.
PfamPF02800. Gp_dh_C. 1 hit.
PF00044. Gp_dh_N. 1 hit.
[Graphical view]
PIRSFPIRSF000149. GAP_DH. 1 hit.
PRINTSPR00078. G3PDHDRGNASE.
SMARTSM00846. Gp_dh_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR01534. GAPDH-I. 1 hit.
PROSITEPS00071. GAPDH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4Y4R8_SHEPC
AccessionPrimary (citable) accession number: A4Y4R8
Entry history
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: April 16, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)