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Protein

Pseudouridine synthase

Gene

Sputcn32_1022

Organism
Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Responsible for synthesis of pseudouridine from uracil.UniRule annotation

Catalytic activityi

RNA uridine = RNA pseudouridine.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomeraseUniRule annotationSAAS annotationImported, RNA-bindingPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
Gene namesi
Ordered Locus Names:Sputcn32_1022Imported
OrganismiShewanella putrefaciens (strain CN-32 / ATCC BAA-453)Imported
Taxonomic identifieri319224 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000006699 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi319224.Sputcn32_1022

Structurei

3D structure databases

ProteinModelPortaliA4Y468
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini18 – 91S4 RNA-bindingInterPro annotationAdd BLAST74

Sequence similaritiesi

Belongs to the pseudouridine synthase RluA family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105C34 Bacteria
COG0564 LUCA
HOGENOMiHOG000275919
KOiK06180
OMAiAHPSPGW
OrthoDBiPOG091H01TV

Family and domain databases

CDDicd02869 PseudoU_synth_RluCD_like, 1 hit
cd00165 S4, 1 hit
Gene3Di3.10.290.10, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR006225 PsdUridine_synth_RluC/D
IPR006224 PsdUridine_synth_RluC/D_CS
IPR006145 PsdUridine_synth_RsuA/RluD
IPR002942 S4_RNA-bd
IPR036986 S4_RNA-bd_sf
PfamiView protein in Pfam
PF00849 PseudoU_synth_2, 1 hit
PF01479 S4, 1 hit
SMARTiView protein in SMART
SM00363 S4, 1 hit
SUPFAMiSSF55120 SSF55120, 1 hit
TIGRFAMsiTIGR00005 rluA_subfam, 1 hit
PROSITEiView protein in PROSITE
PS01129 PSI_RLU, 1 hit
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

A4Y468-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTQEINLKSE ISATQTGLRL DQALAELFPD YSRTRIKEWI LSDAVYVDGV
60 70 80 90 100
IVNKPREKVF ELQQIEIAAT LEEEVHAAAQ AIELNIVYED DHILVINKQA
110 120 130 140 150
GLVVHPGAGN ADGTLMNALL HHCPDIEHVP RAGIVHRLDK DTTGLMVVAK
160 170 180 190 200
TVEAQTHLVA ALQAREITRE YEAIVMGTMT GGGTVDEPIG RHPTKRTHMA
210 220 230 240 250
VHHSGKPAVT HYRVAEKFRN HTRLRLRLES GRTHQIRVHM EYIGHVLVGD
260 270 280 290 300
PVYGGRPKPP KAASPEFFEI LKNFKRQALH AVRLELAHPV SCEIMSWQAP
310 320
IPEDMVILTK ALRQDTVEHP IEYL
Length:324
Mass (Da):36,321
Last modified:May 29, 2007 - v1
Checksum:i96C26F5C10155FFB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000681 Genomic DNA Translation: ABP74751.1
RefSeqiWP_011790408.1, NC_009438.1

Genome annotation databases

EnsemblBacteriaiABP74751; ABP74751; Sputcn32_1022
KEGGispc:Sputcn32_1022

Similar proteinsi

Entry informationi

Entry nameiA4Y468_SHEPC
AccessioniPrimary (citable) accession number: A4Y468
Entry historyiIntegrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: May 23, 2018
This is version 68 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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