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A4Y1M9 (A4Y1M9_SHEPC) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Chorismate lyase EMBL ABP73862.1
EC=4.1.3.- EMBL ABP73862.1
Gene names
Ordered Locus Names:Sputcn32_0126
OrganismShewanella putrefaciens (strain CN-32 / ATCC BAA-453) [Complete proteome] [HAMAP] EMBL ABP73862.1
Taxonomic identifier319224 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length186 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Keywords
   Molecular functionLyase EMBL ABP73862.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processubiquinone biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionchorismate lyase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A4Y1M9 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: C0175474AA64D329

FASTA18621,075
        10         20         30         40         50         60 
MNVTSLSFPY GESIQWFCAD RTDKLPPSPL KEWLLAPGSL TKKLKTCCNQ FEVKVLGEGQ 

        70         80         90        100        110        120 
LAPFKDEYPQ QGSVWVREVL LCLDNVPWVF ARTLIPLSLL SEREADFLGL GSRPLGELLF 

       130        140        150        160        170        180 
SQDNFIPGRI EVASFDTGSR LAHLAASLDQ RVEHLLWGRR RYFHHGQDEM IVSEIFLPAA 


ERAICQ

« Hide

References

[1]"Complete sequence of Shewanella putrefaciens CN-32."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Fredrickson J., Tiedje J., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CN-32 / ATCC BAA-453.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000681 Genomic DNA. Translation: ABP73862.1.
RefSeqYP_001181661.1. NC_009438.1.

3D structure databases

ProteinModelPortalA4Y1M9.
ModBaseSearch...

Protein-protein interaction databases

STRINGA4Y1M9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5078952.
GenomeReviewsGene locus Sputcn32_0126 in contig CP000681_GR.
KEGGspc:Sputcn32_0126.
PATRIC23548800. VBIShePut135485_0133.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3161.
HOGENOMHBG644467.
OMAGRTVIPQ.
ProtClustDBCLSK905613.

Family and domain databases

HAMAPMF_01632. UbiC.
[Tree]
InterProIPR007440. Chorismate--pyruvate_lyase.
[Graphical view]
KOK03181.
PfamPF04345. Chor_lyase. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4Y1M9_SHEPC
AccessionPrimary (citable) accession number: A4Y1M9
Entry history
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: January 25, 2012
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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