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Protein
Submitted name:

Peptidyl-Asp metalloendopeptidase, Metallo peptidase, MEROPS family M72

Gene

Pmen_4162

Organism
Pseudomonas mendocina (strain ymp)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciPMEN399739:GHR6-4235-MONOMER.

Protein family/group databases

CAZyiCBM22. Carbohydrate-Binding Module Family 22.
MEROPSiM72.001.

Names & Taxonomyi

Protein namesi
Submitted name:
Peptidyl-Asp metalloendopeptidase, Metallo peptidase, MEROPS family M72Imported (EC:3.4.24.33Imported)
Gene namesi
Ordered Locus Names:Pmen_4162Imported
OrganismiPseudomonas mendocina (strain ymp)Imported
Taxonomic identifieri399739 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000000229 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121Sequence analysisAdd
BLAST
Chaini22 – 596575Sequence analysisPRO_5002675556Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi399739.Pmen_4162.

Structurei

3D structure databases

ProteinModelPortaliA4XZZ3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini456 – 573118CBM-cenC (cenC-type cellulose-binding)InterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105M0P. Bacteria.
ENOG4111UQ7. LUCA.
HOGENOMiHOG000270267.
OMAiHEAGHNM.
OrthoDBiEOG68DCVR.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
3.40.390.10. 1 hit.
InterProiIPR003305. CenC_carb-bd.
IPR008979. Galactose-bd-like.
IPR024079. MetalloPept_cat_dom.
[Graphical view]
PfamiPF02018. CBM_4_9. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 2 hits.

Sequencei

Sequence statusi: Complete.

A4XZZ3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNVQWLSAL ALALAAHHAQ ANPETVDIMV LYTKDAQALP NGRDIDARIA
60 70 80 90 100
SYIEYTNNAY AKSGVNLRLR LVHKQLLDWA DYYDVSSANL NKFTYDTRVQ
110 120 130 140 150
RLREQYGADL VQLINRTTQG QGYGVCGIAW MGTGPKNSDR FNSGAKEMAY
160 170 180 190 200
GLTGVDCSLS TFAHEAGHNM GLRHSYEQDM QEGYYNTNGH NGTHEWSRGY
210 220 230 240 250
GVQGQFSTIM AYPQVFGARR QAPVFSNPRL RDSECANQAC GQNEHADAVR
260 270 280 290 300
ALNAMAGQIA AFRPTLVPVT GNPGTTNPGT PPTELPWCSK PALKGLVRNG
310 320 330 340 350
EFTTSDDWRA LFGQSDLSLV NVALNCRDNA LQMDARGFDI LATPVSGLRD
360 370 380 390 400
GVQYRLRANS MLKARNSREN VRLAILQEGL DGRLTYSSEQ SASLSVSGNE
410 420 430 440 450
FSRLEKTFTY RTPANARNLY VAVWSDSGSS LLIDEVELQE IQSSTPPAAP
460 470 480 490 500
AQFGWNFESG IGGWSGYHGS ARVSTYASSG RQALEAYQRE YEGSGASVSL
510 520 530 540 550
LGNLEAGKRY RIEADLSIGR STSVSAVAYA YLYVEDSNGR GQYLPLGQRN
560 570 580 590
TRGGSWSKLQ HEVQLPAGPL RRAELLLLGT QRSQSLFIDN VSVTRL
Length:596
Mass (Da):65,382
Last modified:May 29, 2007 - v1
Checksum:i31E3AEE55A23F287
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000680 Genomic DNA. Translation: ABP86909.1.
RefSeqiWP_012019975.1. NC_009439.1.

Genome annotation databases

EnsemblBacteriaiABP86909; ABP86909; Pmen_4162.
GeneIDi5105681.
KEGGipmy:Pmen_4162.
PATRICi19914976. VBIPseMen131592_4213.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000680 Genomic DNA. Translation: ABP86909.1.
RefSeqiWP_012019975.1. NC_009439.1.

3D structure databases

ProteinModelPortaliA4XZZ3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi399739.Pmen_4162.

Protein family/group databases

CAZyiCBM22. Carbohydrate-Binding Module Family 22.
MEROPSiM72.001.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP86909; ABP86909; Pmen_4162.
GeneIDi5105681.
KEGGipmy:Pmen_4162.
PATRICi19914976. VBIPseMen131592_4213.

Phylogenomic databases

eggNOGiENOG4105M0P. Bacteria.
ENOG4111UQ7. LUCA.
HOGENOMiHOG000270267.
OMAiHEAGHNM.
OrthoDBiEOG68DCVR.

Enzyme and pathway databases

BioCyciPMEN399739:GHR6-4235-MONOMER.

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
3.40.390.10. 1 hit.
InterProiIPR003305. CenC_carb-bd.
IPR008979. Galactose-bd-like.
IPR024079. MetalloPept_cat_dom.
[Graphical view]
PfamiPF02018. CBM_4_9. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ympImported.

Entry informationi

Entry nameiA4XZZ3_PSEMY
AccessioniPrimary (citable) accession number: A4XZZ3
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: December 9, 2015
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.