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A4XXP6 (CAPP_PSEMY) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Phosphoenolpyruvate carboxylase

Short name=PEPC
Short name=PEPCase
EC=4.1.1.31
Gene names
Name:ppc
Ordered Locus Names:Pmen_3360
OrganismPseudomonas mendocina (strain ymp) [Complete proteome] [HAMAP]
Taxonomic identifier399739 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length878 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_00595

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. HAMAP-Rule MF_00595

Cofactor

Magnesium By similarity. HAMAP-Rule MF_00595

Sequence similarities

Belongs to the PEPCase type 1 family.

Ontologies

Keywords
   Biological processCarbon dioxide fixation
   LigandMagnesium
   Molecular functionLyase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

oxaloacetate metabolic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

tricarboxylic acid cycle

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

phosphoenolpyruvate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 878878Phosphoenolpyruvate carboxylase HAMAP-Rule MF_00595
PRO_1000025578

Sites

Active site1401 By similarity
Active site5451 By similarity

Sequences

Sequence LengthMass (Da)Tools
A4XXP6 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: CCDCAE0E8362BE08

FASTA87897,128
        10         20         30         40         50         60 
MAEIDARLRE EVHLLGELLG QTIRTQLGDD FLDKIERIRK GAKAGRRGSA AGAEQLTSTL 

        70         80         90        100        110        120 
GDLGDDELLP VARAFNQFLN LANIAEQQHR VRRRRPDEPE PFELRVLDEL LERLLAAGQK 

       130        140        150        160        170        180 
PDELARQLGR LDIELVLTAH PTEVARRTLI QKYDAIAAQL TALDHSDLLP AERERIAQRL 

       190        200        210        220        230        240 
QRLIAEAWHT EEIRRSRPSP VDEAKWGFAV IEHSLWQAVP QFLRRADRSL QAATGLRLPL 

       250        260        270        280        290        300 
EAAPIRFASW MGGDRDGNPN VTARVTREVL LLARWMAADL YLRDVDQLAA ELSMQQASAE 

       310        320        330        340        350        360 
LRAQVGDSAE PYRALLKQLR ERLRETRSWA QQALTADIAP GAAVLQDNHD LLAPLQLCYQ 

       370        380        390        400        410        420 
SLHACGMGVI ADGPLLDCLR RAATFGLFLV RLDVRQDSTR HAAALSEITD YLGLGRYAEW 

       430        440        450        460        470        480 
DEEQRLAFLQ RELDSRRPLL PSDYRPSADT AEVLATCREV AAAPAAALGS YVISMAGAAS 

       490        500        510        520        530        540 
DVLAVQLLLK EAGLRRPMRV VPLFETLADL DNAGPVIDRL LGLPGYRVRL HGPQEVMIGY 

       550        560        570        580        590        600 
SDSAKDAGTT AAAWAQYRAQ EELVRLCGEH QVELLLFHGR GGTVGRGGGP AHAAILSQPP 

       610        620        630        640        650        660 
GSVAGRFRTT EQGEMIRFKF GLPDIAEQNL NLYLAAVLEA TLLPPPAPEP SWRAMMDRLA 

       670        680        690        700        710        720 
DVGVKAYRGV VREHPQFVAY FRQATPEQEL GRLPLGSRPA KRREGGVESL RAIPWIFAWT 

       730        740        750        760        770        780 
QTRLMLPAWL GWEQALGQAL AGGEGELLKN MREQWPFFRT RIDMLEMVLA KADASIAALY 

       790        800        810        820        830        840 
DQRLVEPALQ PLGAQLRDLL SQACAAVLEL TGQSRLLAHS PETLESISVR NTYLDPLHLL 

       850        860        870 
QAELLARCRL RQQAPESPLE QALLVSVAGI AAGLRNTG 

« Hide

References

[1]"Complete sequence of Pseudomonas mendocina ymp."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Detter J.C., Bruce D., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Mikhailova N., Hersman L., Dubois J., Maurice P., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ymp.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000680 Genomic DNA. Translation: ABP86112.1.
RefSeqYP_001188844.1. NC_009439.1.

3D structure databases

ProteinModelPortalA4XXP6.
SMRA4XXP6. Positions 6-878.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING399739.Pmen_3360.

Proteomic databases

PRIDEA4XXP6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABP86112; ABP86112; Pmen_3360.
GeneID5105832.
KEGGpmy:Pmen_3360.
PATRIC19913344. VBIPseMen131592_3410.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2352.
HOGENOMHOG000238648.
KOK01595.
OMAAIPWVFG.
OrthoDBEOG6TJ7T8.
ProtClustDBPRK00009.

Enzyme and pathway databases

BioCycPMEN399739:GHR6-3420-MONOMER.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameCAPP_PSEMY
AccessionPrimary (citable) accession number: A4XXP6
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: May 29, 2007
Last modified: February 19, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families