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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Pseudomonas mendocina (strain ymp)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotation

Cofactori

Mg2+UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei140 – 1401UniRule annotation
Active sitei545 – 5451UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Lyase

Keywords - Biological processi

Carbon dioxide fixation

Keywords - Ligandi

Magnesium

Enzyme and pathway databases

BioCyciPMEN399739:GHR6-3420-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:Pmen_3360
OrganismiPseudomonas mendocina (strain ymp)
Taxonomic identifieri399739 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000000229 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 878878Phosphoenolpyruvate carboxylasePRO_1000025578Add
BLAST

Proteomic databases

PRIDEiA4XXP6.

Interactioni

Protein-protein interaction databases

STRINGi399739.Pmen_3360.

Structurei

3D structure databases

ProteinModelPortaliA4XXP6.
SMRiA4XXP6. Positions 6-878.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
KOiK01595.
OMAiWGFAVIE.
OrthoDBiEOG6TJ7T8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A4XXP6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEIDARLRE EVHLLGELLG QTIRTQLGDD FLDKIERIRK GAKAGRRGSA
60 70 80 90 100
AGAEQLTSTL GDLGDDELLP VARAFNQFLN LANIAEQQHR VRRRRPDEPE
110 120 130 140 150
PFELRVLDEL LERLLAAGQK PDELARQLGR LDIELVLTAH PTEVARRTLI
160 170 180 190 200
QKYDAIAAQL TALDHSDLLP AERERIAQRL QRLIAEAWHT EEIRRSRPSP
210 220 230 240 250
VDEAKWGFAV IEHSLWQAVP QFLRRADRSL QAATGLRLPL EAAPIRFASW
260 270 280 290 300
MGGDRDGNPN VTARVTREVL LLARWMAADL YLRDVDQLAA ELSMQQASAE
310 320 330 340 350
LRAQVGDSAE PYRALLKQLR ERLRETRSWA QQALTADIAP GAAVLQDNHD
360 370 380 390 400
LLAPLQLCYQ SLHACGMGVI ADGPLLDCLR RAATFGLFLV RLDVRQDSTR
410 420 430 440 450
HAAALSEITD YLGLGRYAEW DEEQRLAFLQ RELDSRRPLL PSDYRPSADT
460 470 480 490 500
AEVLATCREV AAAPAAALGS YVISMAGAAS DVLAVQLLLK EAGLRRPMRV
510 520 530 540 550
VPLFETLADL DNAGPVIDRL LGLPGYRVRL HGPQEVMIGY SDSAKDAGTT
560 570 580 590 600
AAAWAQYRAQ EELVRLCGEH QVELLLFHGR GGTVGRGGGP AHAAILSQPP
610 620 630 640 650
GSVAGRFRTT EQGEMIRFKF GLPDIAEQNL NLYLAAVLEA TLLPPPAPEP
660 670 680 690 700
SWRAMMDRLA DVGVKAYRGV VREHPQFVAY FRQATPEQEL GRLPLGSRPA
710 720 730 740 750
KRREGGVESL RAIPWIFAWT QTRLMLPAWL GWEQALGQAL AGGEGELLKN
760 770 780 790 800
MREQWPFFRT RIDMLEMVLA KADASIAALY DQRLVEPALQ PLGAQLRDLL
810 820 830 840 850
SQACAAVLEL TGQSRLLAHS PETLESISVR NTYLDPLHLL QAELLARCRL
860 870
RQQAPESPLE QALLVSVAGI AAGLRNTG
Length:878
Mass (Da):97,128
Last modified:May 29, 2007 - v1
Checksum:iCCDCAE0E8362BE08
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000680 Genomic DNA. Translation: ABP86112.1.
RefSeqiWP_012019432.1. NC_009439.1.

Genome annotation databases

EnsemblBacteriaiABP86112; ABP86112; Pmen_3360.
GeneIDi5105832.
KEGGipmy:Pmen_3360.
PATRICi19913344. VBIPseMen131592_3410.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000680 Genomic DNA. Translation: ABP86112.1.
RefSeqiWP_012019432.1. NC_009439.1.

3D structure databases

ProteinModelPortaliA4XXP6.
SMRiA4XXP6. Positions 6-878.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi399739.Pmen_3360.

Proteomic databases

PRIDEiA4XXP6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP86112; ABP86112; Pmen_3360.
GeneIDi5105832.
KEGGipmy:Pmen_3360.
PATRICi19913344. VBIPseMen131592_3410.

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
KOiK01595.
OMAiWGFAVIE.
OrthoDBiEOG6TJ7T8.

Enzyme and pathway databases

BioCyciPMEN399739:GHR6-3420-MONOMER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ymp.

Entry informationi

Entry nameiCAPP_PSEMY
AccessioniPrimary (citable) accession number: A4XXP6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: May 29, 2007
Last modified: July 22, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.