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A4XXM8 (A4XXM8_PSEMY) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ornithine carbamoyltransferase 2 HAMAP MF_01109
Short name=OTCase 2 HAMAP MF_01109
EC=2.1.3.3 HAMAP MF_01109
Gene names
Name:argF2 HAMAP MF_01109
Ordered Locus Names:Pmen_3342
OrganismPseudomonas mendocina (strain ymp) [Complete proteome] [HAMAP] EMBL ABP86094.1
Taxonomic identifier399739 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length306 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Carbamoyl phosphate + L-ornithine = phosphate + L-citrulline. SAAS SAAS002292 HAMAP MF_01109

Pathway

Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 1/3. HAMAP MF_01109

Subcellular location

Cytoplasm By similarity SAAS SAAS002292 HAMAP MF_01109.

Sequence similarities

Belongs to the ATCase/OTCase family. HAMAP MF_01109

Sequences

Sequence LengthMass (Da)Tools
A4XXM8 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: 59382C950D7BC8BF

FASTA30634,032
        10         20         30         40         50         60 
MSVRHFLSMM DYTPDELVGL IRRGIELKDL RNRGVLFEPL KNRVLGMIFE KASTRTRLSF 

        70         80         90        100        110        120 
EAGMIQLGGQ AIFLSPRDTQ LGRGEPIGDA AIVMSSMLDA VMIRTFAHSN LTEFAAKSRV 

       130        140        150        160        170        180 
PVINGLSDDL HPCQLLADMQ TFLEHRGSIA GKTVAWIGDG NNMCNSYIEA AMQFDFQLKV 

       190        200        210        220        230        240 
ACPAGYEPDA RFLAQAGERV QVLRDPREAV AGAHLVSTDV WASMGQEDEA AQRMALFRPY 

       250        260        270        280        290        300 
QVTPQLLDLA AEDVLFMHCL PAHRGEEISV DLLDDPRSVA WDQAENRLHA QKALLEMLVE 


PAYHHA

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References

[1]"Complete sequence of Pseudomonas mendocina ymp."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Detter J.C., Bruce D., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Mikhailova N., Hersman L., Dubois J., Maurice P., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ymp.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000680 Genomic DNA. Translation: ABP86094.1.
RefSeqYP_001188826.1. NC_009439.1.

3D structure databases

ProteinModelPortalA4XXM8.
ModBaseSearch...

Protein-protein interaction databases

STRINGA4XXM8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5105814.
GenomeReviewsGene locus Pmen_3342 in contig CP000680_GR.
KEGGpmy:Pmen_3342.
PATRIC19913308. VBIPseMen131592_3392.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0078.
HOGENOMHBG579429.
OMAGVDCVVT.
PhylomeDBA4XXM8.
ProtClustDBPRK00779.

Enzyme and pathway databases

BioCycPMEN399739:PMEN_3342-MONOMER.

Family and domain databases

HAMAPMF_01109. OTCase.
[Tree]
InterProIPR006132. Asp/Orn_carbamoyltranf_P-bd.
IPR006130. Asp/Orn_carbamoylTrfase.
IPR006131. Asp_carbamoyltransf_Asp/Orn-bd.
IPR002292. Orn/put_carbamltrans.
IPR024904. Orn_carbamltrans.
[Graphical view]
KOK00611.
PfamPF00185. OTCace. 1 hit.
PF02729. OTCace_N. 1 hit.
[Graphical view]
PRINTSPR00100. AOTCASE.
PR00102. OTCASE.
SUPFAMSSF53671. Asp/Orn_carbamoyltranf. 1 hit.
TIGRFAMsTIGR00658. Orni_carb_tr. 1 hit.
PROSITEPS00097. CARBAMOYLTRANSFERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4XXM8_PSEMY
AccessionPrimary (citable) accession number: A4XXM8
Entry history
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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