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A4XX20

- A4XX20_PSEMY

UniProt

A4XX20 - A4XX20_PSEMY

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Protein
Submitted name:

Alpha amylase, catalytic region

Gene

Pmen_3133

Organism
Pseudomonas mendocina (strain ymp)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciPMEN399739:GHR6-3192-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase, catalytic regionImported
Gene namesi
Ordered Locus Names:Pmen_3133Imported
OrganismiPseudomonas mendocina (strain ymp)Imported
Taxonomic identifieri399739 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000000229: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525 PotentialImportedAdd
BLAST
Chaini26 – 687662 PotentialImportedPRO_5000240748Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi399739.Pmen_3133.

Structurei

3D structure databases

ProteinModelPortaliA4XX20.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000273912.
KOiK01176.
OMAiGQNWHSF.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A4XX20 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRRPSLPTSL TTLACALLCQ FASAEPQLQA WLDQRPVPLQ WSNPAPQRYS
60 70 80 90 100
VELELSAGQL RLQAPNASGS AQPLALYQRQ DWHARSSLSL QIGEPGRYRL
110 120 130 140 150
LFQEDAQPHL RLLPLREQAP RSACRTWQGE ALSVAVGQVF ADGEVLRDAY
160 170 180 190 200
SGQLATVENG RIELTPAAHS DGLLLLEPAE PAPAPAHDWR NATVYFAITD
210 220 230 240 250
RFANGDTGND RSYGRQPDGE QEIGTFHGGD LRGLTGKLDY LQQLGVNALW
260 270 280 290 300
ISAPFEQIHG WVGGGDKGDF RHYAYHGYYA LDFTRLDANM GTEDELRELI
310 320 330 340 350
AQAHARGIRV LFDVVLNHPG YSTLADMQVL GFGALRGGMD QYLPPRWSDW
360 370 380 390 400
QPESFENLHA YHNLIDYQHD AWRQWWGKDW VRADIADYDS PPSVLVDPRQ
410 420 430 440 450
GSLAFLPDFK TESQQPVSLP PFLLRKADTR AVPREGYRVR DYLVEWLSFW
460 470 480 490 500
VREFGVDGFR ADTVKHVELE SWAALRQAAD KARAEWSAAN PDDPMSGSPF
510 520 530 540 550
WMVGEVFGHG PQASVYQDHG FDALINFDFQ GELAARGSEC LRQVEDGYRD
560 570 580 590 600
YAELLANDAR HNFMSYASSH DTSLFFAEQG ERLARQRGLA CALLLAPGAV
610 620 630 640 650
QIYYGDESAR PLGPTGSDPH QGTRSSMNWD AQQQAPVAEL LAHWRLLGQF
660 670 680
RARHPAIGAG RHQQLSSQPY AFARTLGKDR VVIVQGR
Length:687
Mass (Da):76,853
Last modified:May 29, 2007 - v1
Checksum:i6F961366AD1730AF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000680 Genomic DNA. Translation: ABP85886.1.
RefSeqiWP_012019250.1. NC_009439.1.
YP_001188618.1. NC_009439.1.

Genome annotation databases

EnsemblBacteriaiABP85886; ABP85886; Pmen_3133.
GeneIDi5107455.
KEGGipmy:Pmen_3133.
PATRICi19912870. VBIPseMen131592_3175.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000680 Genomic DNA. Translation: ABP85886.1 .
RefSeqi WP_012019250.1. NC_009439.1.
YP_001188618.1. NC_009439.1.

3D structure databases

ProteinModelPortali A4XX20.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 399739.Pmen_3133.

Protein family/group databases

CAZyi GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABP85886 ; ABP85886 ; Pmen_3133 .
GeneIDi 5107455.
KEGGi pmy:Pmen_3133.
PATRICi 19912870. VBIPseMen131592_3175.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000273912.
KOi K01176.
OMAi GQNWHSF.
OrthoDBi EOG65QWH3.

Enzyme and pathway databases

BioCyci PMEN399739:GHR6-3192-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 2 hits.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ympImported.

Entry informationi

Entry nameiA4XX20_PSEMY
AccessioniPrimary (citable) accession number: A4XX20
Entry historyi
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: October 29, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3