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A4XUL5 (A4XUL5_PSEMY) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length713 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

2 H2O2 = O2 + 2 H2O. RuleBase RU000498

Cofactor

Heme group By similarity. PIRSR PIRSR038927-2

Sequence similarities

Belongs to the catalase family. RuleBase RU000498

Ontologies

Keywords
   Biological processHydrogen peroxide RuleBase RU000498
   LigandHeme RuleBase RU000498
Iron
Metal-binding
   Molecular functionOxidoreductase
Peroxidase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processhydrogen peroxide catabolic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functioncatalase activity

Inferred from electronic annotation. Source: UniProtKB-EC

heme binding

Inferred from electronic annotation. Source: InterPro

metal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site921 By similarity PIRSR PIRSR038927-1
Active site1651 By similarity
Metal binding3791Iron (heme axial ligand) By similarity PIRSR PIRSR038927-2

Sequences

Sequence LengthMass (Da)Tools
A4XUL5 [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: 88FDF32433B264B5

FASTA71378,931
        10         20         30         40         50         60 
MKKQSKAAEN GSQMAGTDTL DRGNGNAKLD QLEAFREDAT GEALTTNTGT RIADNQNSLR 

        70         80         90        100        110        120 
AGERGPTLME DFIMREKITH FDHERIPERV VHARGAAAHG YFEVTDAASD LTCAAFLGEV 

       130        140        150        160        170        180 
GKRTPVFVRF STVQGPRGSA DTVRDVRGFA VKFYTEEGNF DLVGNNMPVF FIQDAIKFPD 

       190        200        210        220        230        240 
FVHAVKPEPH NEIPTGASAH DTFWDFVSLT PESAHMVLWT MSDRAIPIAY RSMQGFGVHS 

       250        260        270        280        290        300 
FRLVNAQGQS KLVKFHWRPK AGVCSLVWDE AQKLAGKDPD FHRRGLWEDI ERGLYPEWEL 

       310        320        330        340        350        360 
GLQVMNEEDA QGFGFDLLDP TKLVPEELVP IRVVGRMVLN RNPDNFFAET EQAAFHVGHV 

       370        380        390        400        410        420 
VPGIDFSNDP LLQGRLFSYT DTQLLRLGGP NFNEIPINRP LCPFHNNQRD APHRQQINRG 

       430        440        450        460        470        480 
RAAYEPNSID GNWPRETPPA PTGGGYSSYP EPVHGTKIRV RSPSFADHFS QATLFWRSMS 

       490        500        510        520        530        540 
ATEQQHIVDA YSFELSKVER LYIRERQVKE ILAHIDPLLA LRVAENLGID LDSTSTPSME 

       550        560        570        580        590        600 
GKAEVSPALS QMNLLPGDIR GRRVAVLLTP GCKADEVGSL KKMLEGAGAV AKLLAPSAAA 

       610        620        630        640        650        660 
LKDSDGQPMQ PDGSFASEPS ITVDAVFVPG GEYVLKTLQD DGVAKHYLLE AYKHLKPVAL 

       670        680        690        700        710 
SGDAAQLAAM LGLEEDAGML CGDSFDPLYM RFETALKQHR IWDREMRAKT IPA 

« Hide

References

[1]"Complete sequence of Pseudomonas mendocina ymp."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Detter J.C., Bruce D., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Mikhailova N., Hersman L., Dubois J., Maurice P., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ymp.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000680 Genomic DNA. Translation: ABP85031.1.
RefSeqYP_001187763.1. NC_009439.1.

3D structure databases

ProteinModelPortalA4XUL5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING399739.Pmen_2273.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABP85031; ABP85031; Pmen_2273.
GeneID5108508.
KEGGpmy:Pmen_2273.
PATRIC19911071. VBIPseMen131592_2294.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0753.
HOGENOMHOG000087851.
KOK03781.
OMAESFGDHF.
OrthoDBEOG6P5Z9F.

Enzyme and pathway databases

BioCycPMEN399739:GHR6-2313-MONOMER.

Family and domain databases

Gene3D2.40.180.10. 1 hit.
3.40.50.880. 1 hit.
InterProIPR018028. Catalase.
IPR020835. Catalase-like_dom.
IPR024708. Catalase_AS.
IPR024712. Catalase_clade2.
IPR011614. Catalase_core.
IPR002226. Catalase_haem_BS.
IPR010582. Catalase_immune_responsive.
IPR029062. Class_I_gatase-like.
[Graphical view]
PANTHERPTHR11465. PTHR11465. 1 hit.
PfamPF00199. Catalase. 1 hit.
PF06628. Catalase-rel. 1 hit.
[Graphical view]
PIRSFPIRSF038927. Catalase_clade2. 1 hit.
PRINTSPR00067. CATALASE.
SMARTSM01060. Catalase. 1 hit.
[Graphical view]
SUPFAMSSF52317. SSF52317. 1 hit.
SSF56634. SSF56634. 1 hit.
PROSITEPS00437. CATALASE_1. 1 hit.
PS00438. CATALASE_2. 1 hit.
PS51402. CATALASE_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA4XUL5_PSEMY
AccessionPrimary (citable) accession number: A4XUL5
Entry history
Integrated into UniProtKB/TrEMBL: May 29, 2007
Last sequence update: May 29, 2007
Last modified: July 9, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)